Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C17240
Help
Entry
STMDT12_C17240 CDS
T01742
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Pathway
sem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STMDT12_C17240
Enzymes [BR:
sem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
STMDT12_C17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
BAJ36667
NITE:
STMDT12_C17240
LinkDB
All DBs
Position
1794233..1796215
Genome browser
AA seq
660 aa
AA seq
DB search
MMKQIQEQTALNPLHSHWRLADDRNVLYLSPTGETDAEKTVELSPEQAGRIREITAITSS
LLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVSPTQAQELSFAEQIVSEANSV
IAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNGNAY
EIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTDTVT
GLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLALLSC
LEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGISLA
PRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALENDQLL
IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVVRQI
AKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIENDTLA
LSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLVRAI
VAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTKKMR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagattcaggaacaaacggcgctaaatccccttcactctcactggcgtctg
gctgatgaccgcaacgtgctgtatctctccccgacaggtgaaacggatgcagaaaaaacg
gttgagctatcgccggaacaagccgggcgtatccgggaaataacggcgattacgtccagt
ctgctgataacgttgttgatagaaaaacaggttaccgctgtgcacctggtaggccgtaag
attaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcctgccgtctcg
ccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagccaactcagtc
attgcgatactggatagtcggggaaaaatctgtcgatttaatcggttatgcgaagagtac
acaggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattatttatgagccgc
cgggaggcggttgcctcccgacactacattgagaatttttttcgcaatggcaatgcctat
gaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttatttcgtaataaa
ttcgtccataacggtagcggaaaaaacgaaattttcctgatctgcgcaggcacggatatc
accgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagacaccgtcacc
ggcctgcccaatcgcaatgctattcatgaatttattaatcatgctattgcctcggctggc
gagtcgcaggtgggtatcgtttatctcgatctggataacttcaagaaaattaatgacgcc
tatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctgttgagttgt
ctggaggaagatcaattgctggccagactggggggagatgaattcattgtcctcgctgcc
catacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgtctgcggcaa
ccgtttcgtattggactcattgaagtttacacgggatgcgccattggcatttcgttggcc
ccccggcacggacaggacagcgaaagtctcattcgcactgccgacaccgcaatgtataac
gccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaatcagcgcgta
tttgactatcactggctggatacaaacctgcgaaaagcgctggaaaacgaccagttactt
attcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaagcgctggta
cgctggcaatcgccggaacgcggattaattccgccgctggagttcatctcatacgccgaa
gagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtagttcgccagatt
gcgaaatggcgcgataaggggattaacttgcgcgtagccgttaacttttcggcgcgacaa
ctggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctgaattttgag
tattgcccgatcgatgtcgagctaacggaaagctgcctgatcgaaaacgacacgctggcg
ctatcggttatccagcaatttagtcagctcggcgcccagattcatctggatgattttggc
acagggtattcttcgctttctcaactcgcccggttccctattgatgccgttaaactggat
caggctttcgtcagagatatccataagcaaccgctgtcgcaatctctggttagggcgatt
gtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggtgtagaaaatgctaaa
gaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggctttttattcgccaaa
cctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaaaaaatgcgt
taa
DBGET
integrated database retrieval system
