Salmonella enterica subsp. enterica serovar Typhimurium T000240: STMDT12_C39110
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Entry
STMDT12_C39110 CDS
T01742
Name
(GenBank) tetracycline resistance protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
sem
Salmonella enterica subsp. enterica serovar Typhimurium T000240
Brite
KEGG Orthology (KO) [BR:
sem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sem02000
]
STMDT12_C39110
01504 Antimicrobial resistance genes [BR:
sem01504
]
STMDT12_C39110
Transporters [BR:
sem02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
STMDT12_C39110
Antimicrobial resistance genes [BR:
sem01504
]
Gene variants
Tetracycline resistance genes
Transporters
STMDT12_C39110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Nuc_H_symport
Motif
Other DBs
NCBI-ProteinID:
BAJ38854
NITE:
STMDT12_C39110
LinkDB
All DBs
Position
complement(4063086..4064291)
Genome browser
AA seq
401 aa
AA seq
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MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW
LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD
TTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFFIAALLNIVAFLVVMFWFR
ETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATVWVLFTENRFG
WNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWL
VFPVLILLAGGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHS
LPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETSA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttcgacaaagatcgcattggtaattacgttactcgatgccatggggattggc
cttatcatgccagtcttgccaacgttattacgtgaatttattgcttcggaagatatcgct
aaccactttggcgtattgcttgcactttatgcgttaatgcaggttatctttgctccttgg
cttggaaaaatgtctgaccgatttggtcggcgcccagtgctgttgttgtcattaataggc
gcatcgctggattacttattgctggctttttcaagtgcgctttggatgctgtatttaggc
cgtttgctttcagggatcacaggagctactggggctgtcgcggcatcggtcattgccgat
accacctcagcttctcaacgcgtgaagtggttcggttggttaggggcaagttttgggctt
ggtttaatagcggggcctattattggtggttttgcaggagagatttcaccgcatagtccc
ttttttatcgctgcgttgctaaatattgtcgctttccttgtggttatgttttggttccgt
gaaaccaaaaatacacgtgataatacagataccgaagtaggggttgagacgcaatcgaat
tcggtatacatcactttatttaaaacgatgcccattttgttgattatttatttttcagcg
caattgataggccaaattcccgcaacggtgtgggtgctatttaccgaaaatcgttttgga
tggaatagcatgatggttggcttttcattagcgggtcttggtcttttacactcagtattc
caagcctttgtggcaggaagaatagccactaaatggggcgaaaaaacggcagtactgctc
ggatttattgcagatagtagtgcatttgcctttttagcgtttatatctgaaggttggtta
gttttccctgttttaattttattggctggtggtgggatcgctttacctgcattacaggga
gtgatgtctatccaaacaaagagtcatcagcaaggtgctttacagggattattggtgagc
cttaccaatgcaaccggtgttattggcccattactgtttgctgttatttataatcattca
ctaccaatttgggatggctggatttggattattggtttagcgttttactgtattattatc
ctgctatcgatgaccttcatgttaacccctcaagctcaggggagtaaacaggagacaagt
gcttag
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