Spirosoma endbachense: GJR95_39205
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Entry
GJR95_39205 CDS
T09865
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
senf
Spirosoma endbachense
Pathway
senf03030
DNA replication
senf03410
Base excision repair
senf03420
Nucleotide excision repair
senf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJR95_39205 (polA)
03410 Base excision repair
GJR95_39205 (polA)
03420 Nucleotide excision repair
GJR95_39205 (polA)
03440 Homologous recombination
GJR95_39205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senf03032
]
GJR95_39205 (polA)
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_39205 (polA)
Enzymes [BR:
senf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJR95_39205 (polA)
DNA replication proteins [BR:
senf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GJR95_39205 (polA)
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GJR95_39205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJR95_39205 (polA)
BRITE hierarchy
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_2
HHH_5
HHH
DUF3913
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QHW00687
UniProt:
A0A6P1WAA6
LinkDB
All DBs
Position
complement(9785247..9788315)
Genome browser
AA seq
1022 aa
AA seq
DB search
MAKPQKKLFLLDALALIYRAHFAFNKSPRISSRGVNTSAIFGFMNAMIEVLTKEKPTHIG
VAFDSSKKTFRHEQFPMYKATRQSQPEDISVATPYIKQIVEAMHIPILILDGYEADDIIG
TIAKKAALADFEVYMMTPDKDYGQLVEEHVHIYKPAFMGKPAEKLGVNEILERWQIERIE
QVTDMLGLMGDSVDNIPGIPGVGEKTAQKLIADFGSVENLIANADQLKGKLKENVVNFAD
QGLLSKQLATIHLDVPVAFDEDHLRHTEYDKPRLAALLDELEFRQMKTRLLGGNYDEKPL
PEAFKNTAPAQMNLFDSPGGDTPAFLPFPNMGALKPSGANDLPFDFGSGDAVATPTGKPK
EKRTSVKAPAASASAATPDFVTDSATIEDGERVATEQDQPAYLDVYPDYEIDEVQPERRR
NILSVKHDYRLVDTAELRASLVHYLSLQESICFDSETTAIDPVEADLVGLSFAYRTGEAF
YVPVPEDRDEAQAVVDQFKPVFENPTIGKIGQNLKYDLLMLKKYGVEVQGKLFDTMIAHY
LIEPEMRHNMDMMAMTYLNYQPVEIEALIGKKGKGQLTMREVDVQKVVDYASEDADITLQ
LKEAFAPRLEKDSLYKLFDQVEMPLVQVLTDLELEGVAIDTNALAELSATLEVDMRQVQQ
EIFEIAGESFNIGSPKQLGEILFDKLKLDKNAKKTKTGQYATGEEILSKLEAEHEIARKI
LDYRELIKLKNTYVDVLPLLISKRTGRIHTSFNQAVASTGRLSSVNPNLQNIPIRTPRGQ
EIRKAFVPRGPEFVIMSADYSQIELRIMAAFSGDQTMLDAFNNDVDIHTQTASKVFHVPI
SEVTTEMRRKAKTINFGIIYGISAFGLSQRLKIPRKEAAQIIDEYFAEFPAVKAYMDQSV
EKARGFGYAETILGRRRYLRDINSRNQTDRMFAERNAVNAPIQGSAADMLKIAMIRIHEF
MQAERLKSKMILTVHDELVFDAHRDEIDLLRDRVADIMRNAIPMAVKMETGIGIGENWLL
AH
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccacaaaaaaaactctttctgttagacgcgctggctctgatctatcgcgct
cattttgcctttaataaatcgccccgtatttcgtcgcggggcgtaaatacgtcagcgatc
tttggattcatgaatgccatgatcgaggtattgaccaaggaaaaacccacccacattggt
gttgcattcgattcatcgaagaaaacatttcggcacgaacagtttccaatgtataaggcc
acccgacagtcacaacccgaagacatcagtgtggctacaccgtatatcaagcagattgtt
gaggccatgcacattccgatcctgattctggatggctatgaggccgacgatataattggg
accatcgcaaaaaaagcagctctggctgattttgaggtctatatgatgacccctgacaaa
gattatgggcaattggttgaagagcatgtccatatctacaagcctgcgttcatggggaaa
cctgccgaaaaactgggcgtaaatgagattctggaacgctggcagattgagcggatcgag
caggtaacggatatgcttggcctcatgggcgactcggtcgataacattccgggaattccg
ggagttggtgaaaaaacggcgcaaaaactcattgccgacttcggttcagtcgaaaatctg
attgccaacgccgaccagttaaaaggtaaactcaaagaaaacgttgtcaattttgccgat
cagggcctcctctcgaagcaattggcaaccatccatctcgatgtgccggttgctttcgat
gaagatcacctgcgtcatacagaatatgacaaaccacggctggccgcactgctggacgaa
ctggagttccggcagatgaaaacccgcttactgggcggcaattacgacgaaaaaccactc
cccgaagctttcaagaatacggcaccagcccaaatgaatctgttcgattcacccggcggg
gacacgcctgcgtttctgcctttcccgaatatgggagccctgaaaccatcaggtgctaat
gatttgccgtttgattttggctctggcgatgcagtggctacaccaacaggcaaaccgaaa
gagaaacggaccagcgttaaagccccagctgcttctgcgtcggctgcaacgccggatttc
gtaactgattctgccacgattgaggatggcgaacgtgttgcaactgagcaggaccaaccc
gcttaccttgatgtgtatcctgactatgagatcgatgaggtacagcctgagcgccggagg
aatatattatcggtaaagcacgattatcgcctggtcgatacggccgaactgcgggccagc
ctggtgcattatctgagtcttcaggaaagtatctgttttgactccgaaacgactgctatc
gatccggtagaggccgatctggttggtctatcgtttgcttatcgcaccggcgaagcgttt
tatgtgcccgttccggaagaccgtgacgaggctcaggccgtggtcgatcagtttaagccg
gtattcgaaaatccgaccattggcaagatcgggcagaatctgaagtatgatctgttgatg
ctcaaaaaatacggtgtcgaagtgcagggtaagttgttcgatacgatgattgcccattac
ctcatcgagccggagatgcgccataacatggatatgatggcgatgacgtacctgaactac
cagcccgttgagattgaggcattgatcggcaaaaaaggtaaaggccaattgacgatgcgg
gaagtcgatgtgcagaaagtggtcgactatgcaagcgaggatgccgatatcacccttcag
ctaaaagaagcctttgcgccccgacttgaaaaggacagcctatacaaactcttcgaccag
gtcgaaatgccgcttgtacaggtgctgactgaccttgaattagaaggcgttgcgatcgat
accaatgctctggctgaattatcggcgacgcttgaagtagacatgcggcaagtgcagcag
gagatcttcgagattgcgggcgaatcattcaatatcggttcgccaaagcaactgggtgaa
atcctgttcgataaactcaagctcgataagaacgccaaaaagaccaaaaccggccaatac
gctacgggcgaggagattctgtcgaaactggaagccgagcatgaaattgcccgcaagatt
ctggattaccgcgaattgatcaaactcaaaaacacctacgttgatgtcctgccgttgctg
atcagtaaacgtaccgggcggattcatacgtcgtttaatcaggctgttgcatcgactggg
cgcttgtcgtcggttaatcctaatttacagaatatcccgatccggacaccacgagggcag
gaaattcgaaaagcctttgtgccgcgcggaccggagtttgtgattatgtcggccgattat
tcgcagattgaattgcggatcatggcggccttcagtggcgaccagaccatgcttgacgcc
ttcaacaatgacgtagatattcatacacaaacggccagtaaagtctttcacgtgccgatc
agtgaggtgacgaccgagatgcgccggaaggctaaaaccatcaactttgggattatctat
ggtatttcggcctttgggttaagtcagcgcttaaaaattccgcgtaaggaagcggctcaa
atcattgacgagtactttgccgagtttccggctgtaaaagcctatatggaccagagcgtc
gaaaaagcacgagggtttggctatgccgaaacgattttggggcgccgtcggtatctgcgc
gatatcaactcacgaaaccagactgaccggatgtttgctgagcggaatgcggtcaatgcg
ccgatccagggcagtgcggccgatatgctcaagattgccatgattcgtatccatgaattc
atgcaggccgagcggttaaagtcgaaaatgattctgaccgttcatgatgaactggtgttc
gatgctcaccgtgacgaaatcgacctgctgcgtgatcgtgttgccgacatcatgagaaat
gcgattccaatggccgtgaagatggaaaccggaattggcattggtgaaaactggttactg
gctcactaa
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