Streptomyces endophytica: OJ254_10565
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Entry
OJ254_10565 CDS
T09208
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
seng
Streptomyces endophytica
Pathway
seng00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OJ254_10565 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
seng01007
]
OJ254_10565 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seng03016
]
OJ254_10565 (lysS)
Enzymes [BR:
seng01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OJ254_10565 (lysS)
Amino acid related enzymes [BR:
seng01007
]
Aminoacyl-tRNA synthetase
Class I (A)
OJ254_10565 (lysS)
Transfer RNA biogenesis [BR:
seng03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OJ254_10565 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
UZJ30711
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All DBs
Position
2346875..2348623
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AA seq
582 aa
AA seq
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MAQQSTETDWVSRFADEVIAEAERRAPGKAASGASAPVIVCASGLSPSGPIHLGNLREVM
TPHLVADEIRRRGHEVRHLISWDDYDRYRKVPAGVEGVDESWAEHIGKPLTSVPAPAGSA
YPNWAEHFKAAMTEALAELGVEYDGISQTAQYTSGVYRDQVLHAMKHRADIDAILAQYRT
KKAPAKKSQKPVDEAELEAAEGSGAASEDDGSGGSAGYFPYKPYCGQCEKDLTTVTSYDD
ETTELTYTCTACGFGETVRLSEFHRGKLVWKVDWPMRWAYEGVVFEPSGVDHSSPGSSFV
VGGQIVREIFDGAQPIGPMYAFVGISGMAKMSSSRGGVPTPGDALQIMEAPLLRWLYARR
KPNQSFKIAFDQEIQRLYDEWDKLEAKVADGSALPADAAAHSRAVRTAAGELPRTPRPLP
YRTLASVADITAGHDEQTLRILGELDPANPVTSLDETRPRLDKAEHWINTQVPADQRTIV
RDEPDAELLASLDDQGRESLRLLLDGLDEHWSLDGLTTLVYGVPKVQAGLAPDAKPTPEL
KVAQRAFFALLYHLLVGRDTGPRLPTLLLAVGADRVRKLLGG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtggctcagcagagcaccgagaccgactgggtctccaggttcgcggacgaggtcattgcc
gaggcggagcgccgcgcccccggcaaagcggcgtccggtgcttccgcaccggtcatcgtc
tgcgcctcgggcctgagcccctccggcccgatccacctcggcaacctccgcgaggtcatg
accccgcacctggtcgccgacgagatccgccgccgtggccacgaggtccggcacctcatc
tcctgggacgactacgaccgctaccgcaaggtcccggccggcgtcgagggcgtcgacgag
tcctgggccgagcacatcggcaagccgctgacctcggtcccggcgccggccggctcggcg
tacccgaactgggcggagcacttcaaggccgccatgaccgaggcgctggccgagctgggc
gtcgagtacgacggcatcagccagaccgcgcagtacacctcgggtgtctaccgcgaccag
gtcctgcacgcgatgaagcaccgcgcggacatcgacgcgatcctcgcccagtaccgcacc
aagaaggcccccgcgaagaagtcgcagaagcccgtcgacgaggcggagctggaggcggcc
gaggggtccggcgcggccagcgaggacgacggcagcggcggctcggcgggctacttcccg
tacaagccgtactgcgggcagtgcgagaaggacctcaccaccgtcacctcgtacgacgac
gagaccaccgagctgacctacacctgcaccgcctgcggcttcggggaaacggtccggctg
agcgagttccaccgcggcaagctggtctggaaggtcgactggccgatgcgctgggcgtac
gagggcgtggtcttcgagccgtccggcgtcgaccactcctcgcccggctcgtccttcgtc
gtcggcgggcagatcgtccgcgagatcttcgacggcgcccagccgatcggcccgatgtac
gccttcgtcggcatcagcggcatggccaagatgtcctcgtcgcgcggcggcgtgccgacc
ccgggtgacgcgctgcagatcatggaggcgccgctgctgcgctggctgtacgcccgccgc
aagcccaaccagtccttcaagatcgccttcgaccaggagatccagcggctctacgacgag
tgggacaagctggaggccaaggtcgccgacggcagcgcgctgcccgccgacgcggccgcc
cactcccgcgcggtccgcaccgccgccggcgagctgccccgcacgccccgcccgctgccg
taccgcaccctcgcctccgtcgcggacatcaccgccggccacgacgagcagaccctgcgg
atcctcggcgagctggacccggccaaccccgtcacgtccctggacgagacccggccccgg
ctcgacaaggccgagcactggatcaacacccaggtcccggccgaccagcgcaccatcgtg
cgcgacgagccggacgccgagctgctggcctcgctggacgaccagggccgcgaatcgctg
cggctgctgctcgacggcctcgacgagcactggtcgctggacggtctgaccacgctcgtc
tacggcgtgccgaaggtccaggcgggcctggccccggacgccaagccgacgcccgagctg
aaggtcgcccagcgcgccttcttcgcgctgctctaccacctgctggtcggccgggacacc
ggcccgcggctgcccacgctgctgctggcggtcggcgccgaccgggtgcgcaagctgctc
ggcggctga
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