Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_02980
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Entry
CFSAN001992_02980 CDS
T02479
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFSAN001992_02980
Enzymes [BR:
senj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CFSAN001992_02980
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AGF80920
LinkDB
All DBs
Position
complement(554262..556244)
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AA seq
660 aa
AA seq
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MMKQIQEQTALSPLHSHWRLADNRNVLYLSPTGETDTEKTVELSPEQAGRIREITAITSS
LLITLLIEKQVTVVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEANSV
IAILDSQGKICRFNQSCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNGNAY
EIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRAQERLRILANTDTVT
GLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLALLSC
LEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGISLA
PRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALENDQLL
IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVVRQI
AKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIENDTLA
LSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSKSLVRAI
VAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQTKKMR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacagattcaggaacaaacggcgctaagtccccttcactctcactggcgtctg
gctgataaccgcaacgtgctgtatctctccccgacaggtgaaacggatacagaaaaaacg
gtcgagctatcgccggagcaagccgggcgtatccgggaaataacggcgattacgtccagt
ctgctgataacgttgttgatagaaaaacaggttaccgtagtacacctggtaggccgtaag
attaataaccgtgaatgggctggcagcctggcaacctggcctgatacgcctgccgtcgcg
ccaacgcaggcgcaggagctctcttttgccgagcaaatcgtatcagaagccaactcagtc
attgcgatactggatagtcagggaaaaatctgtcgatttaatcagtcatgcgaagagtac
acgggcttaaaagagcgagatgtaattggtcaaagcgtctttaaattatttatgagtcgc
cgggaggcggttgcctcccggcactacattgagaatttttttcgcaatggcaatgcctat
gaaatcgaacgctggataaagacccgtaaaggccaacgcctgttcttatttcgtaataaa
ttcgtccataacggcagcggaaaaaacgaaattttcctgatctgcgcaggcacggatatc
accgaagaaaggcgggctcaggagcgtttacgcatactggcgaatacagacaccgtcacc
ggcctgcccaatcgcaatgctattcatgaatttattaatcatgctattgcctcggctggc
gagtcgcaggtgggtatcgtttatctcgatctggataacttcaagaaaattaatgacgcc
tatgggcatatgtttggcgatcagctcttacaggccgtttcgctggcgctgttgagttgt
ctggaggaagatcaattgctggccagactggggggagatgaattcattgtcctcgctgcc
catacgtctcaggccgcgctggaagcagtagcctcacgaatccttacccgtctgcggcaa
ccgtttcgtattggactcattgaagtttacacgggatgcgccattggcatttcgttggcc
ccccggcacggacaggacagcgaaagtctcattcgcactgccgacaccgcaatgtataac
gccaaagaaggcggccgcggtcagttctgcgttttttcgccggaaatgaatcagcgcgta
tttgactatcactggctggatacaaacctacgaaaagcgctggaaaacgaccagttactt
attcactatcagcccaaaattacctggcgcggcgaagtacgtagcctggaagcgctggta
cgctggcaatcgccggaacgcggattaattccgccgctggagttcatctcatacgccgaa
gagtcaggactcatcgtcccgctgggccgctgggtgattctggatgtggttcgccagatt
gcgaaatggcgcgataaagggattaacttgcgcgtagccgttaacttttcggcgcgacaa
ctggccgaccagacgctttttactgcgcttaaacaggctttgtacgatctgaattttgag
tattgcccgatcgatgtcgagctaacggaaagctgcctgatcgaaaacgacacgctggcg
ttatcggttatccagcaatttagtcagctcggcgcccagattcatctggatgattttggc
accgggtattcttcgctttctcaactcgcccggttccctattgatgccgttaaactggat
caggctttcgtcagagatatccataaacaaccgctgtcgaaatctctggttagggcgatt
gtcgcggtggctcaggcgctaaatttacaagtgattgccgaaggtgtagaaaatgctaaa
gaagatgccttcctgacaaaaaacggcgtcaatgaacgacagggctttttattcgccaaa
cctatgcccgccgtttcttttgaacgctggtacaaacgttatcagacgaaaaaaatgcgt
taa
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