Serratia entomophila: KHA73_23575
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Entry
KHA73_23575 CDS
T08209
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
senp
Serratia entomophila
Pathway
senp00540
Lipopolysaccharide biosynthesis
senp01100
Metabolic pathways
senp01250
Biosynthesis of nucleotide sugars
Module
senp_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KHA73_23575 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
senp01005
]
KHA73_23575 (rfaD)
Enzymes [BR:
senp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KHA73_23575 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
senp01005
]
Core region
KHA73_23575 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Shikimate_DH
adh_short
Motif
Other DBs
NCBI-ProteinID:
UIW18332
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All DBs
Position
complement(4931481..4932410)
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNDKGYRDILVVDNLKDGTKFVNLVDLDIADYVDKEDFIASI
VAGDDLGEIEAVFHEGACSATTEWDGKYMMDNNYQYSKDILHYCLDREIPFLYASSAATY
GAREEFIEERQYEAPLNVYGYSKFLFDQYVREILPEADSQVCGFRYFNVYGPREGHKGSM
ASVAFHLNNQINRGENPKLFAGSENFKRDFIYVGDVAAVNLWFWETGKSGIFNCGTGRAE
SFQAVADAVVDFHQKGAVESIEFPEKLKGRYQAYTQADLTKLRAAGYNAPFKTVAEGVKE
YMAWLNRTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcactggcggcgccggtatgattggcagcaatatcattaaagcactgaat
gataagggataccgcgatatcctggtggtggacaacctgaaagacggcaccaagtttgtc
aacctggtcgatctggatatcgccgactatgtcgataaagaagattttatcgccagcatc
gtggccggcgacgatctgggcgaaatcgaggcggtattccacgagggcgcctgttccgcc
accacagagtgggacggcaagtacatgatggacaacaactatcagtactccaaagacatc
ctgcactactgtctggaccgcgaaatcccgttcctgtacgcctcttccgccgcgacctat
ggcgcccgtgaagaatttatcgaagaacgccaatatgaagcgccgctgaacgtttacggc
tactccaagttcctgttcgaccagtacgtgcgtgaaattctgcctgaggcggattcacag
gtctgcggcttccgttacttcaacgtctatggcccgcgcgaagggcacaaaggcagcatg
gccagcgtcgccttccatctgaacaaccagatcaatcgcggcgaaaacccgaaattgttc
gccggcagcgaaaacttcaagcgcgactttatctacgtcggcgacgtggcggcagtcaat
ctgtggttctgggaaaccggcaaatccggcatcttcaactgcggtaccggccgggcggaa
agcttccaggcggtggccgatgcggtggtggacttccaccagaaaggtgccgtggaatcc
atcgagttcccggaaaagctgaaaggccgctatcaggcttacacccaggccgatctgacc
aagctgcgcgccgccggttacaatgcgccgttcaaaacggtggcggaaggcgtgaaagag
tacatggcctggttaaaccgcaccgcataa
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