Prodigiosinella confusarubida ATCC 39006: Ser39006_005225
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Entry
Ser39006_005225 CDS
T05290
Name
(GenBank) fumarate reductase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00020
Citrate cycle (TCA cycle)
sera00190
Oxidative phosphorylation
sera00620
Pyruvate metabolism
sera00650
Butanoate metabolism
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera02020
Two-component system
Module
sera_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sera_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sera_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ser39006_005225
00620 Pyruvate metabolism
Ser39006_005225
00650 Butanoate metabolism
Ser39006_005225
09102 Energy metabolism
00190 Oxidative phosphorylation
Ser39006_005225
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ser39006_005225
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Ser39006_005225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
HI0933_like
DAO
DUF6880
Lycopene_cycl
FAD_oxidored
GIDA
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
AUH03586
UniProt:
A0A2I5T3W6
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All DBs
Position
complement(1114703..1116499)
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AA seq
598 aa
AA seq
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MQTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDH
DSFDFHFHDTVAGGDWLCEQDVVDQFVQSCPREMTQLEQWGCPWSRKPDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDDGQARGLVAINMMEGT
LVQIRANAVIMATGGAGRVYRYNTNGGIVTGDGMGMAFRHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGIMVNKDGYRYLQDYGMGPETPLGQPKNKYMELGPRDKVSQAFWHEWR
AGRTISTPLGDVVYLDLRHLGEKKLKERLPFICELAQAYVGVDPVKEPIPIRPTAHYTMG
GIETDQQCETRIKGLFAAGECSSVGLHGANRLGSNSLAELVVFGRIAGEHATQRSLESAP
ANASALDAQARDVEQRLHTLMKQEGTESWAKIRDEMGISMEEGCGIYRTTELMQKTLDKL
AELKERFKRVKITDHSSVFNTDLLYTIELGHSLDVAQCMAHSAINRKESRGAHQRLDEGC
TERDDVNFLKHTLAFYNPEGAPRLEYSDVKITKLPPAKRVYGGEADAQEKSDKEQANG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacctttaatgccgacttggccattatcggggccgggggcgctggtttacgagcg
gcaattgctgccgccgaagctaatccccaactgaagattgctctgatctctaaagtttat
cccatgcgtagccatactgtggctgccgaagggggatcagcagcagtcactcaggatcac
gatagctttgatttccattttcacgataccgtcgcaggtggtgactggttgtgcgaacag
gatgttgtcgaccagttcgtacaaagttgtccacgtgaaatgacccaactggagcaatgg
ggctgcccctggagccgcaaaccggatggttctgtcaacgtgcgccgttttgggggaatg
aagattgagcgtacctggttcgccgctgacaaaaccggcttccatatgctacatacgttg
ttccagacgtccctgaaatacccgcagattcagcgctttgacgaacatttcgtgctggat
attctggtagatgacggacaggctcgcgggcttgtcgccatcaatatgatggaaggcaca
ctggttcagatccgcgccaacgccgtgattatggccaccggtggcgctggccgtgtttac
cgttataacaccaacggcggtatcgtcaccggtgacggtatgggcatggcattccgtcac
ggcgttccactgcgtgatatggagttcgtccagtaccatccaacaggtctgccaggctcc
ggcatcctgatgacggaaggctgccgtggtgaaggcggtatcatggtcaacaaagatggc
taccgttacctacaggattacggtatggggccggaaacgccgctgggtcagccgaaaaat
aaatacatggaactgggaccgcgtgacaaagtatcgcaggccttctggcatgaatggcgt
gccggtcgcaccatttccaccccgctgggtgatgtggtttaccttgacctgcgtcatctg
ggtgaaaagaaactgaaagagcgtctgccgttcatctgtgaattggctcaggcttatgtc
ggtgtcgacccggtgaaagagcccattccaattcgtccgaccgcacactacaccatgggc
ggcatcgaaacagaccagcagtgtgaaacccgaatcaaggggttgtttgccgccggtgaa
tgctcctctgtcggtctgcatggtgccaaccgtctgggctccaactccctggcagaactc
gtcgtatttggtcgtatcgctggcgaacatgccacccagcgctctctggaatcggccccg
gccaacgccagtgcgttggatgcacaggctcgcgatgtagaacagcgtctgcataccctg
atgaaacaggaaggcacagagagctgggcgaagatccgcgacgaaatgggtatatcgatg
gaagaaggttgcggtatctaccgtactaccgagttaatgcaaaaaacgctggataagctg
gctgagctgaaagaacgcttcaaacgcgtgaagattaccgaccattccagcgtattcaat
accgacctgctttataccatcgaactgggacacagcctggacgtcgcgcaatgtatggcg
cactccgctatcaaccgtaaagaatcccgtggtgcgcaccagcgtctggatgaaggctgc
accgaacgtgatgatgtgaatttcctgaaacacacactggcgttctacaacccggaaggc
gcacctcgtctggagtacagtgatgtgaagatcaccaaactaccgccggcaaaacgtgtg
tacgggggcgaggctgacgctcaggaaaaaagtgataaggagcaagcgaatggctga
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