Prodigiosinella confusarubida ATCC 39006: Ser39006_005335
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Entry
Ser39006_005335 CDS
T05290
Symbol
nifD
Name
(GenBank) nitrogenase molybdenum-iron protein alpha chain
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00625
Chloroalkane and chloroalkene degradation
sera00910
Nitrogen metabolism
sera01100
Metabolic pathways
sera01120
Microbial metabolism in diverse environments
Module
sera_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ser39006_005335 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Ser39006_005335 (nifD)
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
Ser39006_005335 (nifD)
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GFIT
Motif
Pfam:
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AUH03605
UniProt:
A0A2I5TGA2
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All DBs
Position
1143216..1144664
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AA seq
482 aa
AA seq
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MTNATSEQNQAIIQEVLEIFPEKARKDRKKHTMVTEPGMESVGSCIVSNRKSQPGVMTVR
GCAYAGSKGVVFGPIKDIAHISHGPVGCGQYSRAGRRNYYTGTSGVDTFGTINFTSDFQE
RDIVFGGDKKLAKLIEELELLFPLTKGISIQSECPVGLIGDDIEAVAKASRQTLGKPVIP
VRCEGFRGVSQSLGHHIANDAIRDWVLDNREGKPFESTPYDVAIIGDYNIGGDAWASRIL
IEEMGLRVVAQWAGDGTLVEMENTPKVKMNLVHCYRSMNYISRHMEEKHGIPWMEYNFFG
PTKIAESLRKIAAHFDDTIRQNAEAVIARHQARADAIIQKYRPRLEGRNVLLYLGGLRPR
HVIGAYEDLGMEIIGTGYEFGHSDDYDRTLPELKEGTLLFDDASSYELEAFVKALKPDLV
GSGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAVFARDMDMTLNNPSWSELTAPWLK
SA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgcaacgagtgaacaaaatcaggcgattattcaggaagtgttagaaatcttc
cctgaaaaggcgcgtaaagatcgtaaaaagcacacgatggtcactgaaccgggtatggaa
agcgtggggagctgtatcgtttccaaccgcaaatctcaaccgggagtgatgacggttcgc
ggttgcgcttatgccggctccaaaggcgtggtgttcggcccgatcaaagacatcgcgcat
atttcccacgggccggttggctgtggtcaatattcacgtgccggacggcgtaattactac
accggcaccagtggagttgacacgttcgggactatcaattttacctctgattttcaggag
cgcgacatcgtgttcggtggcgacaagaagctcgccaaactgattgaggaactggaactg
ttgttcccgctgaccaaaggcatttctattcagtcggaatgtccggtcggcctgattggt
gatgacattgaagcggtcgccaaggccagtcgacagacactgggaaaaccggttatcccg
gtgcgttgtgaaggctttcgcggggtatcgcagtcactggggcaccatattgccaatgat
gcgattcgagattgggtgttggataaccgtgaaggtaaaccctttgaatccacaccgtat
gacgtggccattattggtgactacaacattggcggtgacgcctgggcatcgcgcattttg
atcgaggaaatggggctgcgggtggtcgcgcagtgggcgggtgacggtacgttggtggaa
atggaaaacacgccgaaggtgaagatgaacctggtgcactgctaccgctcgatgaattac
atctcccgtcatatggaagagaagcacggtattccgtggatggaatacaacttcttcggg
ccgactaaaatcgccgaatcgttgcgtaagatcgccgcgcatttcgatgacactattcgt
cagaatgccgaggcggtgattgcccgccatcaggctcgggcggatgcgatcattcagaaa
tatcgtccgcggctggaaggtcgcaacgtgttgttgtatctcggcggtctgcgtcccaga
catgtcattggcgcctatgaagatctcggcatggaaatcatcggcaccggctacgagttc
ggccatagcgatgattacgaccgtaccctgccggaactgaaggaaggcacgttgctgttt
gatgacgccagcagttatgagctggaagcgtttgtcaaagcattgaagcctgacctggtt
ggctccggcatcaaagagaaatatatctttcagaaaatgggggtgccgttccgccagatg
cactcctgggattactccggcccgtatcacggctatgacggttttgccgttttcgctcgt
gatatggatatgacgctcaacaatccgagttggagtgagctgactgcgccgtggctgaaa
tctgcctga
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