Prodigiosinella confusarubida ATCC 39006: Ser39006_010210
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Entry
Ser39006_010210 CDS
T05290
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sera
Prodigiosinella confusarubida ATCC 39006
Pathway
sera00071
Fatty acid degradation
sera00280
Valine, leucine and isoleucine degradation
sera00310
Lysine degradation
sera00362
Benzoate degradation
sera00380
Tryptophan metabolism
sera00410
beta-Alanine metabolism
sera00640
Propanoate metabolism
sera00650
Butanoate metabolism
sera00907
Pinene, camphor and geraniol degradation
sera00930
Caprolactam degradation
sera01100
Metabolic pathways
sera01110
Biosynthesis of secondary metabolites
sera01120
Microbial metabolism in diverse environments
sera01200
Carbon metabolism
sera01212
Fatty acid metabolism
Module
sera_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sera00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Ser39006_010210
00650 Butanoate metabolism
Ser39006_010210
09103 Lipid metabolism
00071 Fatty acid degradation
Ser39006_010210
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Ser39006_010210
00310 Lysine degradation
Ser39006_010210
00380 Tryptophan metabolism
Ser39006_010210
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Ser39006_010210
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Ser39006_010210
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Ser39006_010210
00930 Caprolactam degradation
Ser39006_010210
Enzymes [BR:
sera01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Ser39006_010210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Ser39006_010210
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Ser39006_010210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AUH04459
UniProt:
A0A2I5T6D0
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All DBs
Position
2195513..2197717
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AA seq
734 aa
AA seq
DB search
MTEQPAIVALEKEKSAFSLTLRPDNIGIITMDVAGEKVNTLKAQFARQIMAVLTQAQQHA
ALRGLIFVSAKADSFIVGADITMLDNCTDAKQAEALARTGQETLAYIAGLPFPVVAAIHG
ACLGGGLELALACDYRVCTTEDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVDKALDLMLT
GKHVRSQQALRLGLVDDAVPYSILLETAEAMIRQGKRTSSPVNWRIGFMHSRLIRSLLFR
VVKQKTQARTQGHYPATGKIIQVVRDGLEKGEAEGYLAEARAFGKLVMSPESIALRGLFF
TATALKKTSEAGGEARVIHRVAVLGGGLMGGGIASVTAIRGGLPVRIKDIQEKGVNRALK
HHWQKLEKQLTHRRITHIEQQRQMSLMTGSTDYRGFEQIDIVIEAVFEDLALKQQMVSEV
EQFASPDTIFASNTSSLPIHQIAAKASRPAQVIGLHYFSPVEKMPLVEVIPHTGTSAETI
ATTVALVKKQGKTAIVVADRAGFYVNRILAPYLDEAARCLLEGEPVDTIDQALVRFGFPV
GPFTLLDEVGIDVAIKIAPILTRELGERFSVPPALKVIASDDRQGRKNARGFYRYGYQRH
IWQRSKKDVDNTVYPLLGVTPKAHLDSALMAQRCVMLLLNEAARCLDEGIIRSAREGDIG
AVLGIGFPPFLGGPFRYIDHLGSDTVVKTLQVLQQQYGDRFAPCRALLSRSESAEPYFYP
SRHSDTSALKSEAG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacagccggcaattgtagcgctggagaaggagaaatcggctttctcgctgacg
ttgcgacccgataacattggtattatcacaatggatgtcgcgggtgaaaaagtgaatacc
ctgaaagcgcaatttgccaggcaaatcatggcggtattaactcaggcgcaacagcatgcc
gctctgcgggggttgatttttgtgtcagccaaagcggattcctttatcgtcggggcagat
atcaccatgttggataattgcactgatgccaaacaggccgaagcgttagccagaacaggg
caggagacactggcgtatatcgccggactgccttttcccgtcgtcgccgccattcatggc
gcttgtctgggcggcggactggagctggcactggcatgcgattatcgggtttgtaccaca
gaggataaaaccgtattgggattgccggaagttcagctaggtttgttacctggttcaggc
ggaacacagcgtttaccccgcttaattggtgttgataaagcgctggatcttatgctgaca
ggaaagcatgttcgcagccaacaggctctcaggctgggcctggtggatgacgccgtacca
tacagtattttgctggagacggccgaggcgatgatacgacaaggcaagagaacatcatcg
ccagtgaattggcgtatcggttttatgcatagtcgtctgatcagatcgttgttgttcagg
gtggttaagcagaaaacacaggccaggacgcagggacattacccggccaccgggaaaatt
attcaagtggtacgcgatggtttggaaaagggtgaagcggaaggatatctggcggaagcg
cgagcgtttggcaagctggtcatgtcaccagagtccatcgctctgcgtggtctgtttttc
accgctacagcactgaaaaaaacgtcggaagccggtggtgaagcgcgggtgatccatcgg
gttgctgtgctgggtggcggtttgatggggggaggtattgccagcgtaacggcgattcga
ggcgggctgccggtaagaatcaaagatatccaggaaaaaggggtaaatcgcgcattaaag
caccattggcagaagcttgaaaaacagctaacccatcgacgcataacgcatatcgagcag
caacggcaaatgagcctgatgactggcagtacggattatcgtggttttgagcagatcgat
attgttattgaagcggtatttgaggatttagccctgaagcaacagatggtgtcagaggtt
gagcaatttgcctcacctgatacgatttttgcttcgaatacgtcctcgttgcctattcat
cagattgccgccaaagccagtcgaccagcacaggttatcggcctgcattatttcagcccg
gtggagaaaatgccgcttgttgaggttattccccacactggtactagcgcggaaactatt
gccactacggtggcattagtaaaaaaacagggaaaaacggctattgttgtcgctgaccgt
gcggggttttacgttaaccggattctggcgccttaccttgatgaagcggcgcgttgcctg
ctggaaggcgagccagtagatactatcgatcaggcgctggttcgcttcggttttccggtc
gggccttttacgctgttggatgaagtgggaattgacgttgcgataaagattgctccgatc
ctgactcgtgagctgggtgaacgtttcagtgtgcctcccgcgctgaaggttattgccagc
gatgatcgtcagggacggaaaaatgcgcgtggtttttaccgttatggttatcagcggcat
atctggcaacggtctaagaaagatgttgataataccgtttatccgttgctcggtgttacc
ccgaaagcgcatttggattcggcattgatggcacagcgttgtgtgatgctgttgctgaac
gaagcagcgcgttgtctggatgaaggcattattcgtagtgcccgcgaaggtgatatcggt
gcggtattgggtattggttttccaccatttctgggaggaccatttcgctacatcgatcat
ttggggagcgatacggtggttaaaacactgcaagtattacaacaacagtatggtgatcgt
tttgcgccttgtcgtgctttgctttcccggagtgaaagcgcggaaccgtatttttatcct
tcaaggcattctgatacgtccgccctgaaatctgaggcagggtaa
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