Serratia sp. FS14: L085_03650
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Entry
L085_03650 CDS
T03313
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
serf
Serratia sp. FS14
Pathway
serf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
serf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L085_03650
Enzymes [BR:
serf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
L085_03650
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
GGDEF_2
PAS_10
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AIA46188
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All DBs
Position
790442..792436
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AA seq
664 aa
AA seq
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MPADQGPELLSAHFGTQSPHWRLAFDSNALELSAIKGKAHVAVALSAMEAAKIRRLTGVT
ASLELTITLAGEPLHLHLVGRRVNNLEWAGTASAFSDTQSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHEVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWVKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDL
ITGLPNRNAIQDKINHAIATRGEESFGLVYLDLDNFKKVNDAYGHMFGDRLLVEVALAIL
GCLSPDQVLARLGGDEFLVLAPQSDRERLQTLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEHGKRTYTVFSPEMNKRVAEYMWLDTNLRKGLEQNQ
LVLYYQPKIDAHSGEVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGQWVLQTAA
GQAAQWQERGLNLRVAVNLSARQLADDSIVNDLLGVLHRHRMAPCLLDFELTESSLIEDE
NRARALITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVNFNPVSQSLV
RAIVAAAEALAFRVIAEGVETESENHFLDEVGVDEKQGFLFARPMLPEQLEHWLQSYRPR
SPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagaccaaggccctgagcttcttagcgctcacttcggcacccaaagcccccac
tggcggctggcgtttgacagcaatgccctggaactgtccgctattaagggcaaagctcat
gtcgcggtggcgctcagcgctatggaagcggcgaaaatccgccgtctgaccggcgtgact
gccagccttgagctgaccattacgctagccggtgaaccgctgcatctgcatctggtcggg
cgccgcgtcaacaacctcgaatgggcgggcaccgcttccgccttcagcgacacccaatcc
gtggcgcgcgacctggtgcacggcctctccttcgccgagcaggtggtgtccgaagccaac
tcggtgatcgtgatcgtcgatcagcacggccgcatccagcgcttcaaccggctgagcgag
gagtacaccgggctgcacgaacacgaggtgatcggcaaaaacgttttccaactgtttatg
agcccggaagaagccgccgcttcgcggcgcaacatcgccggcttcttccgcaacggttcg
tcctatgaggtggaacgctgggtaaagacggtcaagggtgaacggctgttcctgtttcgc
aacaaattcgtgcacagcggcagcggaaaaaacgaagtctttctgatctgctccggtacc
gacatcaccgaagaacgccgcgcgcaagagcggctacgggtgctggccaacaccgatctc
atcaccggcctgccgaaccgtaacgccatacaggacaagatcaatcacgccatcgccacg
cgcggtgaagagagtttcggcctggtgtacctcgatctcgacaacttcaaaaaggtcaac
gacgcctacggccatatgttcggcgatcggctcctggtcgaggtcgctctggcgatcctc
ggctgcctgagcccggatcaagtgctcgcccgcctcggcggcgacgaattcttggtgctg
gcgccacaaagcgatcgcgagcgcctgcaaacgctggcgcagcgcattatcgacaggctg
aagaccccttttcgcatcggcctgattgaggtgtataccggttgttcgatcggcatcgcg
ctgtgccctgagcacggcaacgatctcgacagcctgatccgcagcgccgataccgccatg
tacgtcgccaaggagcacggaaaacgcacctataccgtcttctcgccggagatgaacaaa
cgcgtcgccgagtacatgtggctggacaccaatctgcgcaaagggttggagcaaaatcag
ctggtgctgtattaccagcctaaaatcgacgcgcacagcggtgaagtgcacagcgtggaa
gcgttggtgcgctgggattcgccggagcgcggcctgatcccgccgctgcagttcatctcc
tatgccgaggagtccggcctgatcggcccgttgggccaatgggtgctgcaaaccgccgcc
gggcaggcggcgcagtggcaagagcggggattgaatctgcgggtggcggtcaacctctct
gcccgtcagctggcagatgacagcatcgtcaacgacctgctcggggtgctgcaccgtcac
cgcatggctccctgtctgctggacttcgagttgaccgaaagcagcctgattgaagacgag
aatcgcgcgcgcgcgctgatcacccggctgcgcgaactgggcgcgcaggtgcatcttgac
gactttggcaccggctattcgtcgttggcgcagctggcacgcattcctctggacgccatc
aagctggataaaagcttcgtgcgcggggtgaatttcaatccggtatcgcaatcgctggta
cgcgcgatcgtcgcggcggcggaggcgttagccttccgcgtgatcgccgaaggggtggag
accgagagcgaaaaccacttcctcgacgaagtcggcgtggacgaaaaacagggctttctg
ttcgcgcggccaatgctcccggaacaactggagcattggctgcagtcctatcgcccgcgc
tcaccctccgcatga
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