Serratia sp. MYb239: CLM71_04845
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Entry
CLM71_04845 CDS
T05477
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00730
Thiamine metabolism
serm01100
Metabolic pathways
serm01240
Biosynthesis of cofactors
serm04122
Sulfur relay system
Module
serm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CLM71_04845
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CLM71_04845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serm03016
]
CLM71_04845
Enzymes [BR:
serm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CLM71_04845
Transfer RNA biogenesis [BR:
serm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CLM71_04845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVJ16509
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All DBs
Position
1033272..1034720
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTTNIRNVLKQYDENLAVVRHWDFIEVRAKDENQR
PAIADALTRIPGIHHILEVEDRAYTDIHHIFEQTLETYRERLEGKTFCVRVKRRGKQDFS
SQDVERYVGGGLNQHIESARVKLNHPQVTVNLEIEDDKLMMVKARREGIGGYPIGTQEDV
MSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHKVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIINVARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EEEEGNFDFEILERVVREARNVDIRTIASETQEQVTEVETVAAFNADQVILDIRSVDEQD
EKPLQLEQVEVKPLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGYTNIKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagtcaatctgtgcgcttg
cgcttcataaagattcttaccaccaacattcgtaatgtcctgaagcagtatgatgaaaac
ctggcggtggtccggcactgggactttattgaagtccgcgccaaagatgaaaaccagcgt
ccggcgatcgccgacgcgctgacgcgcatccccggtatccaccatattctggaagtggaa
gaccgcgcctacaccgatattcaccatatcttcgagcagacgctggaaacctatcgcgaa
cggctggaaggcaagaccttctgcgtgcgcgtgaagcgccgcggcaagcaggacttcagt
tctcaggacgtggagcgttacgtcggcggcggcctgaaccagcatatcgagagcgcacgg
gtcaaactgaaccatccgcaggtgaccgtcaatcttgagattgaagatgacaaactgatg
atggtgaaagcgcgccgcgaaggtatcggcggctacccgatcggcactcaggaagacgtg
atgtcgctgatctccggcggttttgactccggcgtttccagctatatgctgatgcgtcgc
ggctgccgggtgcactattgcttcttcaacctgggcggcgccgcgcatgagatcggtgtc
aagcaggtggcgcattatctgtggaaccgcttcggcagctcgcacaaggtgcgtttcgtg
gcgatcgattttgagccggtagtgggcgaaattctggaaaaagtcgacgacggccagatg
ggcgtggtgctcaagcgaatgatggtacgcgccgcgtccaaagtggcggagcgctatggc
gtgcaggcgctggttaccggcgaagcgctgggacaggtatccagccagacgctgaccaac
ctgcgtctgatcgataacgcgtcggatacgctgatcctgcgtccgctgatttcccacgat
aaagagcacatcatcaacgtggcgcgccagatcggcaccgaagattttgccaaaaccatg
ccggaatattgcggggtgatctccaagagcccgacggtaaaagcggtgaaggcgaagatc
gaagaagaagaaggcaacttcgatttcgagatcctcgagcgggtcgtgcgcgaagcgcgc
aacgtggatatccgcaccatcgccagcgaaacccaggaacaggtcacggaagtagaaacc
gtggcggcattcaatgccgatcaggtgattctggatatccgctcggtggacgaacaggac
gaaaagccgctgcagctggagcaggttgaggtgaaaccgctgccgttctacaagctgggc
acccagttcggcgatctggatcagagcaaaacctacctgctatattgtgaacgcggcgtg
atgagccgcctgcaggcgctgtatctgctggagcaggggtataccaatattaaagtgtat
cgcccttaa
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