Serratia sp. MYb239: CLM71_16725
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Entry
CLM71_16725 CDS
T05477
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00071
Fatty acid degradation
serm00280
Valine, leucine and isoleucine degradation
serm00310
Lysine degradation
serm00362
Benzoate degradation
serm00380
Tryptophan metabolism
serm00410
beta-Alanine metabolism
serm00640
Propanoate metabolism
serm00650
Butanoate metabolism
serm00907
Pinene, camphor and geraniol degradation
serm00930
Caprolactam degradation
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
serm01200
Carbon metabolism
serm01212
Fatty acid metabolism
Module
serm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CLM71_16725 (fadJ)
00650 Butanoate metabolism
CLM71_16725 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
CLM71_16725 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLM71_16725 (fadJ)
00310 Lysine degradation
CLM71_16725 (fadJ)
00380 Tryptophan metabolism
CLM71_16725 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CLM71_16725 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CLM71_16725 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CLM71_16725 (fadJ)
00930 Caprolactam degradation
CLM71_16725 (fadJ)
Enzymes [BR:
serm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CLM71_16725 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CLM71_16725 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CLM71_16725 (fadJ)
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Gene cluster
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AVJ18653
LinkDB
All DBs
Position
complement(3486476..3488638)
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AA seq
720 aa
AA seq
DB search
MSAATNALHEQRAPQTAFRLTLRPDNIGVITIDVPGEKVNTLKAEFVEQINDVLIQAQQQ
TTLEGLVIISGKPDSFIAGADITMIAACNSAKEAQSLAKKGQSTLAQLAAFPVPVVAAIH
GACLGGGLELALACHSRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGAGKALDMML
TGKQIRARQALRMGLVDDAVPHAILLETAVARARQGWSARRELPWQERLLNGPLGRSALF
AIVRKKTLEKTHGNYPAAERIIQVVRTGLDQGSASGYEAEARAFGELAMTPQSAALRSLF
FASTALKKERGADAQPHALERVGILGGGLMGGGIACVTATRGGLPVRIKDISTQGINHAL
KYSWDVLGKRVRRKRMRPAERQKQMMLISGTTDYCGFEQVDIVVEAVFEDLALKQQMVAE
IEQHAASHTVFASNTSSLPISQIAAKAQRPEQVIGLHYFSPVDKMPLVEVIPHAATSAAT
IATTVALAHKQGKTAIVVADRAGFYVNRILAPYINEAARCLLAGEPIEALDKALVDFGFP
VGPITLLDEVGIDVGTKIIPILVEELGSRFAAPAAFDAVLKDGRKGRKNGKGFYLYPSEG
QQRQRRKRADASVYTLLGVTPKAHLPPAEIAQRCVMMMLNEAARCLEEGVIRSARDGDIG
AVFGIGFPPFLGGPFRYMDELGAETVVKTLQYLQQQHGEHFAPCERLQRMAQQGERFYPR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcgaccaatgcactgcatgagcaacgggctccacagacggcgtttcgtctg
accctgcggccggacaacatcggcgtgattaccatcgacgtgccgggggaaaaggttaat
acgctgaaggcggagtttgttgaacagattaatgatgtgctgatccaggcgcagcagcag
accacgctggaaggcctggtcattatctccggtaagcccgattcctttatcgccggcgcc
gatatcaccatgatcgccgcctgcaacagcgccaaagaggcgcagtcgctggcgaagaaa
gggcagagcacgctggcgcagctggcggcttttccggtgccggtggtggcggcgatccac
ggtgcctgtctgggcggcgggcttgagctggcgctggcttgccacagccgggtatgttcc
ctggacgataaaaccgcgctcggcctgccggaagtgcagctggggctgttgccgggatcc
ggcggcacgcagcggctgccgcgtctgattggcgccggcaaagcgctggatatgatgctg
accggcaaacagatccgcgctcgtcaggcgctgcgcatggggctggtggacgatgcggtg
ccgcacgccattttgcttgagacggcggtcgcgcgcgccaggcagggctggtcggcgcgg
cgcgagctgccgtggcaggagcggttgctcaacggcccgctcgggcgcagtgcgctgttc
gccatcgtgcgcaagaaaacgctggagaagacgcacggcaattatccggcggcggagcgg
attatccaggtggtgcgtaccggtttggaccagggcagcgccagcggttatgaggccgag
gcgcgcgcttttggcgagctggcgatgacgccgcagtcagcggcgctgcgcagcctgttt
tttgcttccaccgcgctgaaaaaggagcgtggcgccgatgcgcagccgcacgcgcttgaa
cgggttggtattctgggcggcggcctgatgggcggcggcattgcctgtgtgacggctacg
cgcggcggtttgccggtacgtattaaggacatcagcacccagggcattaatcacgcgctg
aaatacagctgggacgtgctgggcaagcgggtgcgccgtaagcgtatgcgtccggcggag
cggcaaaagcagatgatgctgatttccggcaccaccgattactgcggtttcgagcaggtg
gacatcgtggtggaggcggtgttcgaagatctggcgctgaagcagcagatggtggcggag
atagagcagcacgccgcgtcgcataccgtctttgcctctaacacctcttcgctgccgatt
agccagatcgccgccaaggcgcagcggccggagcaggtgatcgggctgcactatttcagc
ccggtggacaaaatgccgctggtggaggtgataccgcatgccgcaaccagcgccgcaacc
atcgccactaccgtagcgttggcgcataagcaggggaaaacggcgatagtggtggccgac
cgcgccggtttttacgttaaccgcatcctggcgccctatattaatgaggcggcgcgctgt
ctgctggccggcgagccgatcgaggcgctggataaggcgctggtggatttcggcttcccg
gtggggccgattacactgttggacgaggtcggtatcgacgtcggcaccaaaattattcct
attctggtggaagaactggggtcgcgcttcgccgcgccggcggcgtttgatgcggtgctg
aaagatggccgcaaagggcgcaagaacggcaagggcttctatctgtatcccagcgaaggc
cagcagcgccagcgccgaaaacgtgctgacgcttcggtttatacgctgctcggcgtcacg
ccgaaggcgcatctgccgccggcggagatcgcccagcgctgcgtgatgatgatgctgaac
gaagcggcgcgttgtctggaagaaggcgtgattcgcagcgcccgcgacggcgatatcggc
gcggtgttcggcattggcttcccgccgttcctcggcggaccattccgctatatggatgag
cttggtgcggagacggtggtgaaaaccctgcaatatctgcagcagcagcacggcgagcat
tttgcgccgtgcgaacgtctgcagcgcatggcacaacagggcgagcgtttctatccccgc
tag
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