Serratia sp. MYb239: CLM71_18430
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Entry
CLM71_18430 CDS
T05477
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00310
Lysine degradation
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CLM71_18430
Enzymes [BR:
serm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
CLM71_18430
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
ARMT1-like_dom
Motif
Other DBs
NCBI-ProteinID:
AVJ18965
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All DBs
Position
complement(3853048..3855189)
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AA seq
713 aa
AA seq
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MNVIAIMNHMGVYFKEEPIRELHQALENLGFRLVYPNDRADLLKLIENNARLCGVIFDWD
KYNLELCEEISQLNEYMPLYAFANTYSTLDVSLNDLRMQVRFFEYALGAAQDIAAKIKQN
TDEYIDSIMPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI
SISVSELGSLLDHSGPHKEAEEYISRVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFSRATIAKRVKETPNASWPVH
AVITNSTYDGLLYNTDFIKDTLDVKSIHFDSAWVPYTNFHPIYKGKCGMSGDRVEGKVIY
ETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA
GKRLIEGSVDRAIKFRKEIKRLKVESDGWFFDVWQPEHIDDAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMSKEGEMQPFGIPASIVAKYLDEHGIIVEKTGPYNLLFLFSIG
IDKTKALSLLRALTEFKRAFDLNLRVKNMLPSLYQEAPEFYEDMRIQDLAQNIHRLVEQH
NLPDLMYRAFEVLPSMVMNPYQAFQKELHGEVEEVYLEEMVGKVNANMILPYPPGVPLVM
PGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKNEK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttattgccatcatgaatcacatgggcgtctacttcaaagaagagccgatccgt
gagctgcaccaggcgctggaaaatctgggcttccgcctggtttacccgaacgatcgcgcg
gacctgctgaagctgatcgaaaacaacgcccgcctgtgcggggtgatcttcgactgggac
aaatacaacctggaactgtgtgaagaaatcagccagctcaatgaatacatgccgctgtat
gcattcgccaacacctattcgacgctggacgtcagcctgaacgatttacgtatgcaggtg
cgcttctttgagtatgcgttaggcgctgctcaggatatcgccgccaagataaaacagaac
accgatgagtatatcgacagcattatgccgccgctgaccaaagcgctgttcaaatacgta
cgcgaagggaagtacaccttctgtactccgggccatatgggcggcaccgccttccagaaa
agcccggtcggcagcctgttctatgacttcttcgggccgaacaccatgaagtccgacatt
tcgatttccgtttcggagctgggttcgctgctggatcactccggcccgcataaagaggcg
gaagagtatatttcccgcgtcttcaacgccgagcgcagctatatggtgaccaacggtacg
tcaacggcgaataaaatcgtcggcatgtactcggcgccggcgggaagcacggtgctgatt
gaccgtaactgccataaatcgctgacgcatctgatgatgatgagcgacatcacgccaatt
tatttccgtccgacccgtaatgcctacggtattcttggcggcatcccgcagagtgagttc
agccgcgctaccatcgccaaacgggtgaaagagacgccgaacgccagttggccggtgcat
gcggtgatcaccaactccacctatgacggcctgctgtacaacaccgactttatcaaagac
acgctggacgtgaagtcgattcactttgattccgcctgggtgccttacaccaacttccat
ccgatttataaaggcaaatgcgggatgagcggcgaccgtgtggaaggcaaagtgatttat
gaaacccagtccacccataaactgctggcggcgttttcgcaggcgtcgatgattcatgtg
aaaggcgacattaatgaagaaacattcaacgaagcctacatgatgcataccaccacctca
ccgcactacggtatcgtggcctctaccgaaaccgcggcggcgatgatgaaaggcaacgcc
ggtaagcgtctgattgaaggttctgtcgaccgtgcaattaaattccgtaaagaaatcaaa
cggctgaaagtggagtccgacggttggttctttgacgtctggcagcctgagcatatcgat
gacgccgaatgctggccgctgcgttccgacagcgcctggcacggtttcaaaaacatcgat
aacgagcatatgtacctcgacccgatcaaagtcaccatcctgacgccggggatgagcaaa
gagggtgagatgcagccgttcggtattccggccagcatcgtggcgaaatacctggatgaa
cacggcattatcgttgaaaaaaccgggccgtataacctgctgttcctgttcagcatcggc
atcgataaaaccaaggcgctgagcctgctgcgtgcgctgaccgaatttaaacgtgcgttc
gatctgaacctgcgggtgaaaaacatgctgccgtcgctgtatcaggaagcgcccgagttt
tatgaggatatgcgcattcaggatctggcgcagaatattcaccgcctggttgagcagcac
aatctgccggacctgatgtaccgcgcctttgaagtattgccaagcatggtgatgaacccg
tatcaggccttccagaaagagctgcacggtgaggtggaagaggtgtatctggaagagatg
gtcggtaaggtgaacgccaacatgatcctgccatacccaccgggcgtgccgctggtaatg
ccgggtgagatgctgaccgaagagagccgcccggttctggagttcctgcaaatgctgtgc
gaaatcggcgcgcattatccgggctttgagaccgatatccacggcgcttaccgtcaggca
gacggacgttacaccgttaaagtgctgaaaaacgaaaaataa
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