Serratia sp. MYb239: CLM71_22875
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Entry
CLM71_22875 CDS
T05477
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serm03016
]
CLM71_22875 (trmA)
Enzymes [BR:
serm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CLM71_22875 (trmA)
Transfer RNA biogenesis [BR:
serm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CLM71_22875 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Methyltransf_31
Methyltransf_12
PrmA
Met_10
DREV
Motif
Other DBs
NCBI-ProteinID:
AVJ19784
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All DBs
Position
4800007..4801110
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AA seq
367 aa
AA seq
DB search
MTPENLPIERYDEQLAEKTSRLKTMMSPFGAPEPEVYRSPVQHYRMRAEFRIWHDEDEMY
HIMFDQQTKQRIRIDRFPAASELINRLMQALIAAIKPEPILRRKLFQIDYLSTQSGKIIA
SLLYHRKLDEEWRQHAEQLRDALRAQGFDLHLIGRASKMKMMLDQDYVDEVLPVAGRDMI
YRQVENSFTQPNAAMNVQMLEWALDVTAGAKGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANQIDNVQIIRMSAEEFTQAMNGVRSFNRLQGIELSDYNCETIFVDP
PRSGLDDETVKMVQAYPRILYISCNPETLCANLATLQETHQVTRLALFDQFPYTHHMECG
VLLEKRA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgagaatttgccgattgaacgctacgacgagcagctggcggaaaaaaccagc
cgcctgaaaaccatgatgtcgccgttcggggcgcccgagccggaagtgtaccgctcgcca
gtccagcactaccgcatgcgcgccgagtttcgcatctggcatgatgaagacgagatgtac
cacatcatgttcgatcagcagaccaagcagcgcatccgcatcgatcgtttcccggccgcc
agcgagctgattaaccgcctgatgcaggcgctgatcgccgccatcaaaccggaacccatc
ctgcggcgtaagctgttccagattgattatctctccacccaaagcggcaaaatcatcgcc
tcactgctgtatcaccgcaaactggacgaagagtggcggcagcatgcggagcaactgcgt
gacgcgctgcgcgcgcaaggcttcgacctgcacctgatcggccgtgcgtcaaaaatgaag
atgatgctggatcaggattatgtcgatgaagtgctgccggtcgccggccgcgacatgatc
taccgccaggtggaaaacagctttacccagcccaacgcggcgatgaatgtgcaaatgctg
gagtgggcgctggacgtgaccgccggcgccaaaggcgatctgctggagctgtactgcggg
aacggcaatttctcgctggcgctggcgcgcaacttcgagcgcgtactggccaccgagatc
gccaagccttcggttgcggcggcgcaatacaatatcgccgccaatcagatcgataacgtg
cagatcattcggatgtcggcggaagagtttactcaggcaatgaacggcgtgcgcagcttc
aaccgtctgcagggcattgaattaagtgactataactgcgagacgatttttgtcgatccg
ccgcgcagcgggctggatgacgagacggtgaagatggtgcaggcctacccgcgcattctg
tatatttcctgcaatccggaaacgctgtgcgccaatctggcgaccctacaggaaacgcat
caggttacacgtctggcgctgttcgatcagttcccgtatacccaccatatggagtgcggc
gtactgttggaaaaacgcgcctga
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