Prodigiosinella confusarubida ATCC 39006: CWC46_07205
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Entry
CWC46_07205 CDS
T05968
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
serq
Prodigiosinella confusarubida ATCC 39006
Pathway
serq00053
Ascorbate and aldarate metabolism
serq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CWC46_07205 (garD)
Enzymes [BR:
serq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CWC46_07205 (garD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
Motif
Other DBs
NCBI-ProteinID:
AUG99629
UniProt:
A0A2I5T4X7
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All DBs
Position
complement(1567651..1569225)
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AA seq
524 aa
AA seq
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MSDHTRENAAQEQPLYIKVHESDNVAIVVNNNGLRIGTRFNNGLELIEHIPQGHKVALVD
IAASDPIIRYGEIIGYALRDILQGSWIDESLVALPKAPALETLPLATKVPPPLPPLEGYT
FEGYRNPDGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVEGVVALNHLYGC
GVAINAPAAIVPIRTIHNLALNPNFGGEVMIIGLGCEKLQPERLLEGTPDVQPISPDDTS
IVRLQDESHVGFRSMVDDILTMADKHLQRLNRRRRETVPASELVVGTQCGGSDAFSGVTA
NPAVGFASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINVDVGKRLLEEMAWYDNYLDNG
QTDRSANPSPGNKKGGLANVVEKALGSIAKSGTSPIMEVLSPGQRPTKRGLIYAATPASD
FVCGTQQLASGITVQVFTTGRGTPYGLLAVPVIKMATRTALANRWHDLMDIDAGTIATGE
ATIEDVGWQLFHFILDIASGRKKTWSDQWGLHNALAVFNPAPVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcacaccagagaaaacgcagctcaagagcagccactttatataaaagttcat
gagtctgataatgttgccattgtggttaataataatggcttacgcatcggtacccgtttt
aataacggattggaattgattgaacatattccacagggacataaagtcgcgctggtagat
attgccgcatcagatccgattatccgttacggtgaaattattggctatgcattgcgggat
atacttcagggaagttggatcgatgagtcattggtcgcattgccaaaggctccggcgttg
gaaacgctaccgctggcaaccaaagttccccctccattgccgccgctagaagggtatacc
tttgaaggttaccgtaatcctgatggcagtgtcggtaccaaaaatttgttaggtatcacc
actagcgtacattgtgtggctggcgtcgtggattatgtggtgaagattattgaacgcgat
ctattacccaaatatccaaacgtagagggtgtagtcgcactgaatcatctatatggctgt
ggtgtggctatcaatgctccagcagcgattgtaccgatccgtaccatccacaatctggca
cttaaccccaatttcggcggtgaagtcatgattatcggactgggttgtgaaaaactgcaa
cctgagcgtctgctggaaggaacgccggatgtgcagcccatttcgccagatgataccagt
atcgtgcgcttgcaggatgaatctcacgtaggattcagatctatggtggatgacatcctg
accatggcggataaacatttacaacgcctcaatcggcgccgtcgggaaactgtaccggct
tccgaactggtggttggcacgcagtgcggcggcagcgatgccttctccggtgtaaccgcc
aacccagcagtaggatttgcgtctgatttgctggtccgttgtggtgccactgtgatgttc
tccgaagtcaccgaagtacgtgatgccatccatttgttgacgccacgcgctattaatgtg
gacgttggcaaacgtctgctggaagagatggcctggtacgacaattatctggataacggg
cagacagatcgcagtgccaacccgtcgcctggtaataaaaaaggggggctggcaaatgtg
gtggaaaaagcgctcggttcgattgccaaatcaggcaccagcccgattatggaagtgctg
tcaccgggtcagcgccccacgaaacgaggcctgatttacgccgcgacacctgccagcgat
ttcgtctgtggtacacagcaactcgcatccggaattaccgtgcaggtatttactaccggt
cgcggtacgccttatggactgcttgcggttccggtaatcaaaatggcgacccgtacagca
ctggccaaccgctggcatgacctcatggatattgatgccggtactattgccactggcgaa
gccactattgaagacgtcggctggcagttgttccactttatcctggatatcgccagtggt
agaaagaaaacgtggtccgatcaatggggactgcataatgctttagcggttttcaacccg
gcgccagtaacctga
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