Suncus etruscus (white-toothed pygmy shrew): 125995837
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Entry
125995837 CDS
T09902
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
125995837 (CDKAL1)
Enzymes [BR:
setr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125995837 (CDKAL1)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125995837 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
125995837
NCBI-ProteinID:
XP_049620767
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All DBs
Position
18:50360084..51034943
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AA seq
584 aa
AA seq
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MPSASCEKLLDDIEDIVTQEDSKPQDRHYARKQVVPRVRKRKRNPGKLEEEQDSPPSDST
IPGIQKIWIRTWGCSHNNSDGEYMAGQLATYGYKITENASDADLWLLNSCTVKNPAEDHF
RNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGYSVRLL
GQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPVDELV
DRVRQSFQEGVCEIWLTSEDTGAYGRDIGTSLPALLWKLVEVIPKGAMLRLGMTNPPYIL
EHLEEMAKILNHPRVYSFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIA
TDIICGFPGETDEDFQETVKLVEDYKFPSLFINQFYPRPGTPAAKMGQVPAQVKKQRTKD
LSQVFHSYNPYDHKIGERQQVLVTEESSDSKFYVAHNRFYEQVLVPKNPSFMGKMVEVDI
YESGKHYMKGQPVTDAKVYTPSISKPLARGEISGLTEELRHRLGNHSSSRETTTVTAPTR
VAPCLPKLHPDHAQTQRAWLCWLCWLCWLCWLCWLCLFCIRAYN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgagaaactcctggacgacatagaagatatcgtgacgcaggaa
gattcaaagccacaagacagacattacgcaagaaagcaagttgtccctagggtgcgaaag
cgaaagcgcaacccaggaaagttggaggaagagcaagacagtcccccaagtgacagcaca
attcccgggatccagaaaatttggatacggacgtggggctgttctcataataactccgat
ggagaatatatggccggacagctggctacttacggatataaaatcacagagaacgcatct
gatgcagacttatggcttctcaatagctgtactgtaaaaaaccctgccgaagatcacttt
aggaattcaattaaaaaagctcaagaggagaacaagaaaattgtgctagctggctgtgtt
cctcaagcccagcctcgtcaggattaccttaaagggctgagcatcattggggtccaacag
atagatcgtgtggtagaagttgtagaagaaacgattaaaggttactcggtgagactgctg
ggtcagaagaaggataatggaagacgcttggggggagcccgactggatttgcccaagatc
aggaagaatccgctgatagaaatcatttccatcaataccgggtgtctcaacgcttgtacg
tactgcaaaacgaagcatgcccgaggaaatctggccagttacccggtcgatgagctggta
gatcgagtcaggcagtcttttcaagagggagtttgtgagatctggttgaccagtgaagac
acgggggcctatggcagagatatcggcaccagcctccctgccctgctatggaagctggtc
gaagtgattcccaagggagcgatgctcaggcttggcatgacaaacccaccttatatttta
gagcatctggaggaaatggcgaaaatccttaatcacccccgagtctattcttttctgcac
atccctgtgcagtcggcctctgattctgtgctcatggacatgaaaagagaatactgcgta
gctgacttcaaacgagtcgtggattttctgaaagagaaagttcctggaataacgattgct
acagatattatctgtggttttcctggagaaacagatgaggattttcaagaaacagtgaaa
ctcgttgaagactacaaatttccaagcctctttattaaccaattttaccccagaccagga
actcccgctgcaaagatgggacaagttccagcgcaagtgaaaaagcaaagaacaaaagat
ctctctcaggtgtttcattcttacaacccatatgatcataagattggtgaaagacagcaa
gtattagtaacagaagaatcttctgattccaagttttacgttgcccataatcggttctac
gaacaggttttggtcccaaagaacccgtcgttcatggggaaaatggtggaagtggacatt
tatgaatcaggaaaacattatatgaaagggcaaccagtaacagatgccaaagtctacaca
ccatccatcagtaaaccattagcaagaggcgaaatctctggcttaactgaggagctcaga
cacaggcttgggaatcattccagttcccgggagaccacaactgtgacagcacccaccaga
gtggccccttgcttgcccaaacttcatccagaccatgcgcagacacagcgggcctggctc
tgctggctctgctggctctgctggctctgctggctctgctggctctgcttgttctgtatc
agagcctataattaa
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