Suncus etruscus (white-toothed pygmy shrew): 125996000
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Entry
125996000 CDS
T09902
Name
(RefSeq) zinc finger protein 420-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125996000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
125996000
03036 Chromosome and associated proteins [BR:
setr03036
]
125996000
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125996000
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125996000
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
125996000
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125996000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
Zn-ribbon_8
zf-C2H2_11
Zn_ribbon_SprT
zf-C2H2_5
OSTMP1
FYVE
DUF3268
Motif
Other DBs
NCBI-GeneID:
125996000
NCBI-ProteinID:
XP_049620906
LinkDB
All DBs
Position
18:63855483..63963455
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AA seq
790 aa
AA seq
DB search
MGPHRLTSWPQAMVTFPDVAVSFSQEEWPCLDASQRDLYRDVMLETYEHLQAVGYCGVKP
ALISWLEGGALQSQQRAVFSGSLSDGTWDYSWPHASKVTPAEPMQEIHPCHFCSLTFSIQ
NFLSPHRKLHQSSGIHPGISVRKLPQSENFCPGDQNQWQQHKVDVSRVDILENQKHKESS
VPLAKNIRHERIPTTFSSLVCSQIVSSSKHVMAIEEETNTGQKENPKNTGRVVAPQQGFN
DGSNLITHKRTQTGKKPCVCRECGRGFTQKSSLIRHQKIHTGDRPYVCRECGRCFTEKSS
LIRHQTIHTGERPYVCRECGRSFSDRSTLFTHQKIHTGEKPHVCRECGQNFRWRSTLITH
QKTHMGKGKRPYFCSGCGQCFISKSLLITHRSAHTGEMPHVCRRCGQGFRGRRRLIAHQR
THIGESSHACRDCGRVFGYRSLLITHQRTHTGEKPFVCRECGQGFSQQSNLHRHQIQMMH
TGEMSHICRKCGQVFSDRITLITHQKTHTGKMLHVCKECGRDFKCRSELITHQRTHTGEK
PYVCRECGQAFSLKSSLVRHQKLHTGEKPHVCKECGRGFTVKSNLTRHRKTHSGKKPYVC
REHGRSFSDRSTLFTHQRIHTGEKPHVCRKCGKGFRWRSILIIHQGTHTGEKPHVCRECG
QGFSLRSTFIKHQKTHIGEKSHICRDCGRGFSYRSHLIIHQRKHTGEYPHVCKECGRSFT
VKSTLTRHQKTHSGDKPYVCRECGRGFNRLSGLNLHQRVHTNEKPCVCSECGQGFRWKSN
LITHQRTHTG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcccacaccgcctgacatcctggccccaggctatggtgacttttcccgatgtggct
gtgagcttctcacaggaggagtggccatgcttggatgcctctcagagggacctctacaga
gacgtcatgctggagacctacgaacacctgcaggctgtagggtattgtggtgttaagcct
gcgctgatctcttggttggaaggaggagccctgcagagtcagcagagagctgttttttcg
ggttcactcagtgatgggacttgggattattcctggccccatgcttcaaaagtcactcct
gcagaaccaatgcaagaaatccatccatgtcacttctgctctctgaccttctccatacag
aacttcctcagtcctcacaggaaacttcatcaatcctctggaatccacccaggaatatct
gtgagaaagctacctcaatctgagaatttttgtccaggtgatcagaaccaatggcagcaa
cacaaagttgatgtatcaagggttgacatacttgaaaatcaaaagcacaaagaaagctcc
gtacctttggctaagaatataaggcatgaaagaattccaacaaccttttctagtttagtt
tgcagtcaaatagttagctctagtaaacatgtgatggcaatagaggaagaaactaacaca
gggcagaaagaaaatccaaagaacacaggtcgagtagttgcacctcagcaaggcttcaat
gatggatcaaatctcatcacacacaagaggactcaaacaggaaagaagccctgtgtttgc
agggagtgtggacgaggctttactcagaaatcatctctcatcagacaccagaagatacac
acaggggataggccctatgtttgcagggagtgtgggcgatgcttcactgagaaatcatct
ctcatcagacatcagacaatacacacaggggagaggccctatgtttgcagggagtgtggc
cgaagcttcagtgacaggtcaactctcttcacacaccagaagatacacacaggagagaaa
ccccatgtgtgcagggagtgtgggcaaaactttagatggaggtcaactctcatcacacac
cagaagacacacatggggaaggggaagaggccctatttttgcagtgggtgtgggcagtgt
ttcatttcaaagtcactactcatcacacaccggagtgcacatacaggggagatgccccat
gtttgcaggaggtgtgggcaaggcttcagagggaggagacgtctcatcgctcaccagagg
acacatataggggagagttctcatgcttgcagggattgtgggcgagtcttcggatatagg
tcacttctcatcacacaccagagaacacacacaggggagaagccatttgtttgcagggag
tgtgggcaaggtttcagtcagcagtcaaatctccacagacaccaaatccaaatgatgcac
acaggggagatgtcccatatttgcaggaagtgtgggcaagttttcagtgatagaataact
ctcatcacacatcagaagacacacacagggaagatgcttcatgtttgcaaggagtgtggg
cgagacttcaaatgtaggtcagaactcatcacacaccagaggacacacactggggaaaag
ccctatgtttgcagggagtgtgggcaagcattcagtctgaaatcatctcttgtcagacac
cagaagttgcacactggggagaagcctcatgtttgcaaggagtgtggacgaggcttcact
gtgaaatccaatctcaccagacaccggaagacacactccgggaagaagccttatgtttgc
agggagcatggccgaagcttcagtgacaggtcaactctcttcacacaccagaggatacac
acaggagagaaacctcatgtgtgtagaaagtgtgggaaaggattcagatggagatcaatt
ctcatcatacaccaaggtacacacacaggagagaagccccatgtttgcagggagtgtggg
caaggcttcagtctgagatcaactttcatcaaacaccagaagacacacataggtgagaaa
tcccatatttgcagggattgtggacgaggcttcagttacaggtcacatctcataatacac
cagaggaaacacacgggggagtatccccatgtttgcaaggagtgtggacgaagcttcact
gtgaaatccactctcaccagacaccagaagacacactccggggataagccgtatgtttgc
agggagtgtggccgaggcttcaatcggctctcaggtctgaacttacaccagagggtacat
acaaatgagaagccatgtgtttgcagtgagtgtggacaaggcttcagatggaaatcaaat
ctcatcacacaccagaggacacatacaggttag
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