Suncus etruscus (white-toothed pygmy shrew): 126000814
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Entry
126000814 CDS
T09902
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04010
MAPK signaling pathway
setr04020
Calcium signaling pathway
setr04713
Circadian entrainment
setr04925
Aldosterone synthesis and secretion
setr04927
Cortisol synthesis and secretion
setr04929
GnRH secretion
setr04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
126000814 (CACNA1H)
04020 Calcium signaling pathway
126000814 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
126000814 (CACNA1H)
04925 Aldosterone synthesis and secretion
126000814 (CACNA1H)
04927 Cortisol synthesis and secretion
126000814 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
126000814 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
126000814 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126000814 (CACNA1H)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
126000814 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3034
Motif
Other DBs
NCBI-GeneID:
126000814
NCBI-ProteinID:
XP_049623915
EnsemblRapid:
ENSSRTG00000035368
LinkDB
All DBs
Position
2:5671592..5704602
Genome browser
AA seq
2248 aa
AA seq
DB search
MTGGAPAAAAADEVRVALGAPPSGSSPGAAERGAALPESPGATERGADAGADEEPRVPYP
ALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFRPCEDVECRSERC
SILEAFDDFIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNV
SLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWA
GLLRNRCFMDSTFVRNNNLTFLQPYYMPEEGEENPFICSSRRDNGMQKCSHIPIRRELRV
ECTLGWEAYGQAEGAGAGHNACINWNQYYNVCRSGDSNPHNGAINFDNIGYAWIAIFQVI
TLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMRE
QRARYLSNDSTLASFSEPGSCYEELLKYVGHICRKFRRRSLRLCARWQSRWCKKVDPSSA
PHSQDSRRRCTAPVHHLVYHHHHHHHHHYHLSHGSPRRPGPEATGPSSRIVPAGAPPSPG
HRPSVESVRSVYHADCHVEGPQERPQSVCTAAATAASLKLAAGLGARNYPTILPSGLGSS
KGSARPKGTKARGSPGAGKHSPLSLSPSPHEKIQHLVGEHGLGQAPSRLSGLSVPCSLPS
PQAGTLTCELGSCPYCARALDDLQLELSGSESGDSEGERVYEFTQDVRHGDHRDPTEQPP
TGAGGPRHTHPSEWGGPGRVWGILSAKLLRIVDSKYFNRGIMAAILTNTLSMGVEYHEQP
DELTNALEISNIVFTSMFALEMLLKLLAYGPLGYIRSPYNIFDGAIVVISVWEIVGQADG
GLSVLRTFRLLRVLKLVRFMPALRRQLVVLMRTMDNVATFCTLLMLFIFIFSILGMHLFG
CKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVAL
MTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKLSTHLEEDLDKLHSLGSADMKMYSL
TVVPNGHLEAWGSLPPPLIMRTAATPMPTPKNSPHLDTALSLLESRRGSSCSVEPQPGDQ
KSPSSLRSSPCTPWGPGSAWSSRRCSRHSLGRAPSLKRRSQCGERESLLWGEGRGSTDDE
AEDGRPLAHGSSLDLQPAQPSALLPKVQDGPGQGLALPSEFFLRIDSQKDDGADLDEDVE
DSCCARLHKVLDPYKPEWCRQREPWSLYLFSPQNSFRVSCQKIIAHKFFDHVVLVFIFLN
CITIALERPDIDPGSNERVFLSVSNYIFTAIFVTEMMVKVVALGLVSGEHAYLQSSWNVL
DGLLVLVSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSL
RPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGSDTRNISTKAECRAAHYRWVRRKYNF
DNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVL
NMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERKRRKAQRRPYYADYPPTRRSIHSL
CTSHYLDLFITFIIGINVITMSMEHYDQPKSLDEALKYCNYVFTIVFVIEAVLKLVAFGF
RRFLKDRWNQLDLAIVLLSIMGITLEEIEMSAALPINPTIIRIMRVLRIARVLKLLKMAT
GMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTN
FGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPAISPVYFVTFVLVAQFVLVN
VVVAVLMKHLEESNKEAREDAELDAELDAELEPEWNQGSPPGAQPRLGVTPDSPPLLTVR
KVSASRALSLPNDSYMFRPVMPAAAPRPQPLQELELEVYTGATSGETSSPLSPPASPWMS
SHAPAVINSPSRSRDALRPVPATPRGPTRTPSLSHLFCRQETVCTDGPEGHVDSSRVSGS
GWTQPEGKVPVRAPSLGSSHRSPPCSPRPAGTRSRKPTPRQLCVPGLDPAPSSSGETEAP
DLADEEVSHINSAAPPGPGPGGGFLDLPGRPAEPHWASAELEGEAGPTAELATGTRRKKK
MSPPCISVEPPAEDDGATRPPGAEGSCTTLRRRTPSCEPAPHRDTLEPTEGERRAPAPGR
PEHLAVPCFAYDTLDTEGPGGDLVVHGSHGTRPDPSNPAPGTSDSLVPSRGSPERGQDTH
LGLPQSSPHRAGPPLGTPTSDDTIVEPL
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggggcgcgccggcggcggcggcggcggacgaggtccgagtggccctgggcgcg
ccgccctccggctccagccccggggcggccgagcgcggcgcggcgctcccggagagcccc
ggggccacggagcgcggcgcggacgcgggcgccgacgaggagccgcgcgtgccgtacccc
gcgctggcggccacggtcttcttctgcctcgggcagaccacgcggccgcgcagctggtgc
ctgcggctggtgtgcaatccgtggttcgagcacgtcagtatgctggtcatcatgctcaac
tgcgtgaccctgggcatgttccgaccctgtgaagatgtggagtgccgctcggagcgctgc
agcatcctggaggccttcgacgacttcatcttcgccttcttcgcggtggagatggtcata
aagatgatcgctctgggcctcttcgggcagaagtgttacctgggcgacacctggaataga
ctagatttcttcatcgtcatggcgggcatgatggaatactctttggacgggcacaacgtg
agcctctcggccatccggaccgtgcgtgtgctgcggccccttcgcgccatcaaccgtgtg
cccagcatgcggatcctggtcacactgctgctggacacgctgcccatgctgggcaatgtc
cttctgctctgcttcttcgtcttcttcatctttggcatcgtgggtgtccagctctgggct
ggtctgctgcgcaaccgctgcttcatggacagcacctttgtcaggaacaacaacctcacc
ttcctgcagccttattatatgccggaggagggcgaagagaacccattcatctgttcttca
cgccgcgacaatggcatgcagaagtgttcgcacatccccatccgtcgtgagctgcgtgtg
gaatgcacactgggctgggaggcttatggacaggccgagggtgcaggcgctggccacaac
gcctgcatcaactggaatcagtactacaacgtctgccgctctggtgactcgaaccctcac
aatggtgccatcaatttcgacaacatcggctatgcctggatcgccatcttccaggtgatc
acgctggagggctgggtggacattatgtactacgtcatggatgcgcattccttctacaac
ttcatctacttcattctgctcatcatcgtgggatccttcttcatgatcaacttgtgcctg
gtggtgatcgccacgcagttctccgagacaaagcaacgggaacatcagctgatgcgggag
cagcgggcgcggtacctgtccaacgacagcacgctggccagcttctcggagcctggcagc
tgctacgaggagctgctcaaatatgtgggccacatctgccggaaattccggcgccgcagc
ctgcgcctctgtgcccgctggcaaagccgttggtgcaagaaggtggatccgagcagtgcc
ccgcacagccaggactccaggcgccggtgcacagcccctgtccaccacctggtctaccac
catcatcatcatcaccaccaccactaccacctcagccatggcagcccccgccggcctggc
cccgaagccactggcccgagcagcaggatagttccagcaggggcgccgccctcacctggc
cacaggcccagtgtggaatctgtgcgtagtgtgtatcacgctgactgccacgtcgagggg
ccacaggagaggccacagtccgtctgcaccgctgctgccactgcagccagcctcaagctg
gccgcgggactgggcgcccggaactaccccaccatcctgccctcgggcttaggcagcagt
aaaggcagtgccaggcccaaggggacaaaggcaagggggtctccgggggccggaaagcac
agccctctgagtctaagccccagtccccatgagaagatccagcacctggttggggagcat
ggtctgggccaggcccccagtcgcctgtcgggcctgagtgtaccctgctcgctgcccagc
ccacaggctggcactcttacctgtgagctgggcagctgtccgtactgtgccagagccctg
gacgaccttcagctggagctgagcgggtctgagagcggggactcagaaggcgagcgggtg
tacgagttcacacaggatgtgcggcatggagaccaccgtgaccccacagagcagcccccc
accggcgcaggtggtccgaggcacacacaccccagtgagtggggtgggccaggccgcgtc
tggggcatcctcagtgccaagctgctccgcattgtagacagcaagtacttcaaccgtggc
atcatggcggccatcctcaccaacacgctcagcatgggcgtcgagtaccacgagcagccc
gacgagctgaccaatgccctggagataagcaacatcgtgttcaccagcatgttcgcgctg
gagatgctgctgaagctgctggcctacgggccgctgggctacattcgcagcccctacaac
attttcgatggcgccatcgtggtcatcagtgtctgggagatcgtggggcaggcagacggc
gggctctcggtgcttcggaccttccggctgttgcgtgtgctcaagctggtgcgcttcatg
cccgcgctacggcgccagctggttgtgctcatgcgcaccatggacaatgtggccaccttc
tgcacgctgctcatgctcttcatcttcatcttcagcatcctcggcatgcatctgtttggc
tgcaagttcagcctgaagacggacactggggacacagtcccagacaggaagaacttcgac
tccctgctgtgggccattgtcacagtgttccagattctcacgcaggaggactggaacgtc
gtcctctacaatggcatggcctccacttcctcctgggctgccctctactttgtggccctc
atgacctttggcaactatgtccttttcaacctgctggtggccatcctggtggagggtttc
caggcggagggtgacgccaacagatcagacacggatgaggacaagctgtcaacccacctg
gaggaggacttggacaagctccacagcctggggtctgcggacatgaagatgtactcgctc
acagtggtccccaatgggcacctggaagcctggggcagcctgccccctccccttatcatg
cgcacagcggccacccccatgcccacgcccaagaactccccacacctggacaccgccctc
agcctcctggagtcccgcaggggaagcagctgctccgtggaaccccagccgggcgaccag
aagtcaccgtccagtctccgcagctccccctgcacgccctggggcccgggcagcgcctgg
agcagccgccgctgcagccgccacagcctgggtcgcgcgcccagcctcaagcgccggagc
cagtgcggcgagcgcgagtcgctgctgtggggcgagggcaggggcagcaccgacgacgag
gccgaggacgggcggcccctcgcccacggcagctcgctggacctgcagcccgcgcagccc
agcgccctgctgcccaaggtccaggacggccccgggcagggcctggcgttgcccagcgag
ttcttcctgcgcatcgacagccagaaggacgacggcgccgacttggacgaggacgtggag
gacagctgctgcgcccgtcttcacaaggttctggacccctacaagcccgaatggtgccgg
cagcgggagccttggtccctgtaccttttctccccacagaacagcttccgggtctcctgc
cagaagatcatcgcccacaagttctttgatcacgtggtccttgtctttattttcctcaac
tgcatcaccatcgcactggagcggccagacatcgaccctggcagcaatgaacgcgtcttc
ctcagtgtctccaactacatcttcacagccatcttcgtgaccgagatgatggtgaaggtg
gtggctctggggctggtctctggcgagcatgcctacctgcagagcagctggaacgtgctg
gacggactgctggtgttggtgtccctggtggacatcatcgtggccatggcttctgctggt
ggtgctaagatcctgggcatcctgcgagtcctgcgtctgctgcgcacactcagaccgcta
agggtcatcagccgagccccaggcctgaagctggtggtggagacgctaatctcgtcgctc
agacccatcgggaacattgtgctcatctgctgcgccttcttcatcatctttggcatcctg
ggggtgcagctctttaaggggaagttctactactgcgagggctcggacaccaggaacatc
tctaccaaggcagagtgccgggctgcccactaccgctgggtgcggcgcaaatacaacttt
gacaacctgggccaggccctgatgtccctgttcgtgctgtcatcgaaggatggctgggtg
aacatcatgtacgatggactggacgctgtgggtattgaccaacagcccgtgcccaaccac
aacccctggatgctgctgtacttcatctccttcctgctcatcgtcagcttcttcgtgctc
aacatgtttgtgggcgtcgtggtggagaacttccacaagtgccggcagcaccaggaggcc
gaggaggcgaggcggcgggaggagaagcggctgcggcggctggagaggaagcgccggaag
gcccagcgccggccctactatgccgactaccctcccacccgccgctccatccactccctg
tgtaccagccactacctggacctcttcatcaccttcatcattggcatcaacgtcatcacc
atgtctatggagcactacgaccagcccaagtccctggatgaggctctgaagtactgcaac
tacgtgttcacgatcgtctttgtcatcgaggcagtgctgaagctggtggcctttgggttc
cggaggttcctcaaggacaggtggaaccaactggacctggccatcgtgctgctgtccatc
atgggtatcacgctggaggagatcgagatgagcgccgcgcttcccatcaaccccaccatc
atccgcatcatgagggtcctgcgcatcgcccgtgtgttgaagctgctgaagatggccacg
ggtatgcgggccctgctggacacagtggtgcaggcgctgccccaagtggggaacctcggc
ctgcttttcatgctcctgttttttatctatgctgccttgggagtcgagctatttggaagg
ctggagtgcagtgaagataacccatgtgagggcctgagccgccacgccactttcaccaac
ttcggcatggccttcctcacgctcttccgcgtgtccacgggggacaactggaatggcatc
atgaaggacacgctgcgtgagtgcgcccgcgaggacaagcactgcctcagctaccttcca
gccatctcgcccgtctacttcgtcaccttcgtgctggtggcccagttcgtgctggttaat
gtggtggtggccgtgctcatgaagcacctggaggagagcaacaaagaggcacgagaggat
gccgagctggacgccgagctggacgccgagttggagccagagtggaatcaggggtcgcca
cctggagcccagcctcgccttggcgtcacacccgacagccccccgctcctgactgtgcgc
aaggtgtcggcgtccagggccctctcgctgcccaatgacagctacatgttccggcctgtc
atgcctgctgctgccccacggccacagccactgcaggaactggagttggaagtgtacaca
ggtgccacctcaggcgaaacctcctccccgctctcaccacctgccagcccctggatgtcc
tcgcacgcccctgcggtcatcaactcaccctctcgcagcagagatgccctccggccagtg
cccgcaacccctcgaggtcccactcgcacccccagcctcagccacctattctgcagacag
gagactgtatgcacagatggcccagaaggacacgtggacagctccagagtcagcggctcg
ggctggacacagcctgaggggaaggtccccgtgagggcaccgtctttggggtcctcccat
cggtccccaccctgctcccccagacccgccggtacccgttcccgcaaacccaccccgagg
caactctgtgtgcccggcctagacccggcaccgagcagcagcggggaaactgaggccccg
gatctggccgacgaggaggtcagccacatcaacagtgctgccccgccagggcctgggcca
gggggtggcttcctggacctgcctggacgaccggcagagccccactgggcatcagctgag
ctggaaggggaagcggggcccacagctgagcttgctactgggacacgccgaaagaagaag
atgagccctccttgcatctccgtggagcctccggccgaggatgacggtgccacgaggccc
ccaggggccgagggcagctgcaccacactgcgccgcaggaccccatcctgtgagccggcc
ccacacagggacaccctggagcccactgagggtgagcggcgagcaccagcccctggccgc
cctgagcacctggccgtgccctgcttcgcctatgacactctggacacggagggcccaggt
ggggacttggtcgtgcacggcagtcacggcacacgaccagatcccagcaatcctgccccg
gggacctctgattccctcgtcccctccagagggtccccagaaagagggcaagacactcac
ctgggcctcccccagagctccccccacagagcagggcctccgctgggcacccccacttca
gacgacactatagttgagcccctgtaa
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integrated database retrieval system
