Suncus etruscus (white-toothed pygmy shrew): 126001222
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Entry
126001222 CDS
T09902
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04014
Ras signaling pathway
setr04015
Rap1 signaling pathway
setr04020
Calcium signaling pathway
setr04024
cAMP signaling pathway
setr04080
Neuroactive ligand-receptor interaction
setr04713
Circadian entrainment
setr04720
Long-term potentiation
setr04724
Glutamatergic synapse
setr04728
Dopaminergic synapse
setr05010
Alzheimer disease
setr05014
Amyotrophic lateral sclerosis
setr05017
Spinocerebellar ataxia
setr05020
Prion disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05030
Cocaine addiction
setr05031
Amphetamine addiction
setr05033
Nicotine addiction
setr05034
Alcoholism
setr05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
126001222 (GRIN2A)
04015 Rap1 signaling pathway
126001222 (GRIN2A)
04020 Calcium signaling pathway
126001222 (GRIN2A)
04024 cAMP signaling pathway
126001222 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126001222 (GRIN2A)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
126001222 (GRIN2A)
04728 Dopaminergic synapse
126001222 (GRIN2A)
04720 Long-term potentiation
126001222 (GRIN2A)
09159 Environmental adaptation
04713 Circadian entrainment
126001222 (GRIN2A)
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
126001222 (GRIN2A)
09164 Neurodegenerative disease
05010 Alzheimer disease
126001222 (GRIN2A)
05014 Amyotrophic lateral sclerosis
126001222 (GRIN2A)
05017 Spinocerebellar ataxia
126001222 (GRIN2A)
05020 Prion disease
126001222 (GRIN2A)
05022 Pathways of neurodegeneration - multiple diseases
126001222 (GRIN2A)
09165 Substance dependence
05030 Cocaine addiction
126001222 (GRIN2A)
05031 Amphetamine addiction
126001222 (GRIN2A)
05033 Nicotine addiction
126001222 (GRIN2A)
05034 Alcoholism
126001222 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126001222 (GRIN2A)
Ion channels [BR:
setr04040
]
Ligand-gated channels
Glutamate (ionotropic)
126001222 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
126001222
NCBI-ProteinID:
XP_049624390
EnsemblRapid:
ENSSRTG00000036785
LinkDB
All DBs
Position
2:complement(10009968..10263975)
Genome browser
AA seq
1470 aa
AA seq
DB search
MGRLGYWALLLLPALLVWRGPAPAAAAEKGPPALNIAVLLGHSHDMSERQLRTLWGPEQG
AGLPLDVNVVALLMNRTDPKSLITHVCDLMSGARIHGLVFGDDTDQEAVAQMLDFISSQT
FVPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLVTTIFPGY
REFISFVKTTVDNSFVGWDVQNIITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLIL
SEARSLGLTGYDFFWIVPSLVSGNTELIPQEFPSGLISVSYDDWDYSLEARVRDGLGILT
TAASSMLEKFSYIPEAKASCYGQSEKSETPQHTLHQFMVNVTWNGKDLSFTEEGYQVHPR
LVVIVLNKDREWEKVGKWENQGLSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVE
DIDPLTETCVRNTVPCRKFVKINNSTNEGVNVKKCCKGFCIDILKKLSRTVKFTYDLYLV
TNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRS
NGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFT
IGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVD
QVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTKFNQKGVEDALVSL
KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALL
QFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIWEHL
FYWKLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEDKKKSPDFSGSQTNVLKLLRSAK
NVPHAASLNPARLDSPKGTADFIPRGSLIMDMVPDKGNPIYADARAFPGKDGFFGDGMNE
LQTFVANRHKDNLNNYVFQGQHPLTLNEANPNTVEVAVSTDAKGSSRPRQLWKKSMESLR
QDSLGQNPGMQREEMVSENRAHSLKSPRYLPEEVAHSDISEASSRATCHREPDNSKNHKT
KDNFRRSLASKYPKEGCEAERTSFLKTKGSSPRDKIYTIDAEKEPSSFHLDPPQLVENLA
MPDSFPDPYQDPSENLHPGDATLPLNRTPLHNAATTTSADGLPNNDQYKLYSSKHLTLKD
KCSPRSEGSDRYRPSSTHCRSCLSHLPTYAGHFTVRSPFKCDACLRLGHLYDIDEDQMLQ
DTGHRAGPDDPYQQDWAQNNTAQLPKNKLRMSRQHSYDNLLDKAREADSSRPNRSISLKD
RERLLEGNLYGSLFSVPTSKLLGNKSSLFPQGLEDSKRSKSLLPDHTSDNPFLHSYGGEH
RLVIGRCPSDPYKHSLPSQAVSDSYLRSSLRSTASYCSRDSRGHNDVYVSEHVLPYAANK
NNLYPAAPRVMNSCSNRRVYKKMPSIESDV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgggcagactgggctactgggcattgctgctcttgccggcccttctggtctggcgaggc
cccgcgccagctgcggcggccgagaaggggcctccagcactgaacatcgcggttctcctg
ggccacagccacgacatgagcgagcgccagctgcggacgctgtggggtcccgagcagggc
gcggggctgcccctcgacgtgaacgtggtggccctgctgatgaatcgcaccgaccctaaa
agcctcatcacccacgtgtgtgacctcatgtcgggggcgcggatccacggcctggtgttc
ggagacgacacagaccaggaggccgtggcccagatgctggattttatctcctcgcagacc
ttcgtcccgatcctggggatccacggaggcgcgtctatgatcatggctgacaaggacccc
acatccaccttcttccagttcggtgcatccatccagcagcaggccacagtcatgctgaaa
atcatgcaggactatgactggcacgtcttctccctggtcaccaccatcttccccggctac
cgcgagttcatcagcttcgtcaagaccactgtggacaacagtttcgtgggctgggatgtg
cagaacatcatcacgttggacacatccttcgaggatgccaagactcaggtgcagctgaag
aagatccattcgtcggtcatcctgctctattgctccaaggacgaggcggtgcttatcctg
agtgaggcacgctcactgggcctcaccggctatgacttcttctggattgtgcctagcctg
gtgtcaggcaacacggagctcatccctcaggagttcccatcgggcctcatttctgtctct
tatgatgactgggactacagcctggaggccagggtgagggacggcctgggtatcctcacc
acggccgcgtcgtccatgcttgaaaagttctcctacattcccgaggccaaggccagctgc
tacgggcagtcggagaagtctgagacgccccagcacactctgcaccagttcatggtcaac
gtgacgtggaatggcaaagacttgtcgttcacagaggagggttaccaggtgcacccccgg
ctggtggtgatcgtgttgaacaaagaccgagagtgggaaaaggtgggcaagtgggagaac
cagggcctgagccttcgacacgcggtatggccacgctacaagtccttctcagattgcgag
cctgatgacaaccacttgagcatcgtcaccctggaggaggctccctttgtcatcgtggag
gacattgacccgctcaccgagacgtgtgtcaggaacactgtgccctgccgcaagtttgtc
aagataaacaattccactaatgagggtgtgaacgtcaagaagtgctgcaaaggcttttgc
atcgatattctcaagaagctctcgagaactgtgaagttcacgtacgacctctacctggtg
acaaatgggaaacatggcaagaaggtcaacaatgtgtggaacggcatgatcggagaagta
gtctaccagagggcggtcatggcagtgggctcactaaccatcaatgaggagcgctcagaa
gtagtggatttctctgtgcccttcgtggaaacaggaatcagtgtcatggtctccagaagc
aacgggaccgtctctccctctgcatttctagagcccttcagcgcttctgtctgggtgatg
atgttcgtcatgctgctcatcgtctcggccattgcggtctttgtctttgaatatttcagc
ccagttggatataaccggaacttggccaaaggcaaagcacctcacgggccctcgttcacc
atcgggaaggccatctggctgctatgggggctggtgttcaacaactcagtgcctgtgcag
aaccccaaggggaccacgtccaagatcatggtgtctgtgtgggccttcttcgctgtcatc
ttccttgccagctacacggccaacctggctgccttcatgatccaagaggagtttgtggac
caagtgacgggcctcagcgataaaaagttccagcggcctcacgattattccccacccttc
cgctttggcacggtgcccaatggcagcacggagaggaacatccgtaacaactacccttac
atgcaccagtacatgaccaagttcaaccagaagggtgtggaggacgcgctagtcagcctg
aaaactgggaaactggatgccttcatctatgatgcggccgtgctcaactacaaggctggc
cgggatgagggctgcaagctggtgaccatcggcagtggctacatctttgccaccacgggc
tatggcatcgccctgcagaaggggtccccctggaagaggcagatcgacctggcactgcta
cagtttgtgggggatggagagatggaggagctggagaccctctggctcacaggtatctgc
cacaatgagaagaacgaggtcatgagcagccagctggacatagacaacatggcgggcgtg
ttctacatgctggcggctgccatggccctcagcctcatcaccttcatctgggagcatctc
ttctattggaagctgcgcttctgcttcactggcgtatgctccgaccgcccggggctgctc
ttctccatcagcaggggcatctacagctgcatccacggtgtgcacatcgaggataagaag
aaatccccggattttagtggctcccagaccaacgtgctgaagctgctgcgttcggccaag
aacgtaccacatgcagccagcctgaaccccgcacgccttgactctcccaagggtactgct
gatttcatcccccgaggctcactcatcatggacatggtccccgacaagggcaaccccatc
tacgctgatgcccgggccttccctggcaaagacggcttcttcggggatggcatgaatgag
ctgcagacgtttgtagccaaccggcacaaggacaatcttaataactatgtcttccaggga
cagcaccctctgaccctcaatgaagccaaccccaacactgtagaggtagccgtgagcacc
gatgctaaaggcagttcccgtccacgacagctctggaagaaatccatggagtccctgcgc
caagactcgctgggccagaacccggggatgcagagggaggagatggtgagtgagaaccgt
gcccactcactcaagagcccacgctacctccctgaggaggtggcccactcggacatctca
gaggcatcgagccgggccacctgccaccgggagcctgacaacagcaagaaccacaagacc
aaggacaacttccggaggtccctggcctccaagtaccccaaggaaggctgtgaggcagaa
cgcacgtcctttctgaaaaccaaaggcagctccccaagggacaagatctacaccatcgat
gccgagaaggagcccagcagcttccatctggacccaccacagctggtggagaacttggcc
atgcccgacagcttcccagacccttaccaggatcccagcgagaacctgcatccaggggat
gccacgctaccccttaaccggacacccctgcacaatgccgccaccaccacatccgccgac
gggcttcccaacaatgaccagtacaagctctactcttccaagcacttgacactgaaggac
aagtgttcaccgcgcagtgagggcagtgaccgctacaggcccagctccacgcactgccgg
agctgcctgtctcacctgcccacctatgctggccacttcaccgtgcggtccccgttcaag
tgtgatgcttgtctgcgtctgggccacctctatgacattgatgaggaccagatgctgcag
gacactggccaccgggccggcccggatgacccttaccagcaggactgggcccagaacaac
acggcgcagctcccaaagaacaagttgcgcatgagccggcagcactcgtacgacaacctc
ctggacaaggctcgtgaggctgacagcagccggcccaaccgcagcatcagcctgaaggac
cgcgagcggctgctggaaggcaacttgtatgggagtctcttcagtgtcccaaccagcaaa
ctcttggggaacaaaagctccctcttccctcaaggcctagaggacagcaagcggagcaag
tcgctcttgccggaccatacctccgacaaccctttcctccactcctatgggggcgagcac
cgcctggtgatcgggaggtgcccctcggacccctacaaacactccctgccctcacaggct
gtaagtgacagctaccttcggtcgtccctgaggtccaccgcgtcatactgttcccgggac
agcagaggccacaatgacgtgtacgtttcagagcatgttttgccttatgctgcaaataag
aataatctctacccagcggcccccagggttatgaactcctgcagcaatagacgcgtgtac
aagaaaatgcctagtatcgaatctgatgtttaa
DBGET
integrated database retrieval system