Suncus etruscus (white-toothed pygmy shrew): 126010905
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Entry
126010905 CDS
T09902
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126010905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126010905
03036 Chromosome and associated proteins [BR:
setr03036
]
126010905
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
126010905
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126010905
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
126010905
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
126010905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
KRAB
zf-C2H2_4
zf-C2H2_5
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
126010905
NCBI-ProteinID:
XP_049630460
LinkDB
All DBs
Position
6:complement(365628..374379)
Genome browser
AA seq
548 aa
AA seq
DB search
MGSPGLPPCPQVRGSEGSRELGERRPQERWARRGLRKESGDGVWRRCFGLRALGSPLPAQ
DPPLPPLDVRFRAGAPGNRRPALADKETLSRDFFLTWGKTVNSFLLYGTTAKREFFWLYA
DFLPSGAGNPDKVTFRDVALNFSQDEWPCLDASERKLYRDVMLETYENLQAIGHCRVKPK
LISWLEEGALERLQRDVFGAEPKPEIYPCSFCSVAFSSQNFLSHHMKLRHPSEIPRGTAA
RKHPQSENYCSFDQNQWQQHYDLYNDKVDEPRNDILENQRHKENGIPLVKKIRHKRISAT
ISRLYHRKRGSSNKHEMAVEEEIPMGLKENPTDTGKVVARKRVPRILRDKYVRPGKGFSE
GSNLITHQSTHLEKTHVCMECGKSFSLFSNLIRHQRTHTGEKPYVCRGCGRGFSEKANLI
RHQSIHTGEKPHICRDCGRGFIHKCHLIRHQRTHTGEKPYVCSECERGFSRLCVLLKHQR
THTGEKPYVCRECGRCFNQASNLITHLKTHTGEKPHVCRECGRGFSHKSHLIRHQRTHTE
EKPYVCSE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtccccaggcctgccgccctgtccgcaggtaagggggagcgagggctccagggaa
ctcggggagcgacgcccccaggagcggtgggcgcggagaggtctgaggaaggagtccggg
gacggcgtgtggcggcgctgcttcggactccgtgctctcgggtccccgctgcccgcccaa
gacccccccctccccccgttggatgtcaggttccgggccggagctcctgggaataggcgc
ccggctttggccgacaaggagaccttgagccgggactttttcctcacttgggggaaaact
gtcaattcatttctcctttatggtaccacagcaaaacgggaattcttctggctttatgct
gactttctaccttccggtgctgggaaccccgataaggtgaccttccgtgatgtggccttg
aacttctcccaggatgagtggccatgcctggacgcctctgagaggaagctctacagagat
gtgatgctggagacttatgagaacctgcaggctatagggcattgcagagtgaagccgaag
ctgatctcctggttggaagaaggagccctggagaggctacagagagacgtgtttggtgca
gaaccaaagccagaaatttatccatgctccttctgctctgtggctttctccagtcagaac
tttctcagtcatcacatgaaacttagacatccctctgagatcccccgaggaacagctgca
agaaagcaccctcagtcagagaactattgttcgtttgatcagaatcaatggcagcaacat
tatgacctgtataatgacaaagttgacgaaccaaggaatgacatacttgaaaatcaaagg
cacaaagaaaacggtatacctttggttaagaagataaggcataaaagaatttcagcaacc
atatctagactatatcacaggaaaagagggagctctaataaacatgagatggcagtggag
gaagaaattcccatggggctgaaagaaaatccaacggacacaggtaaagtagttgcaaga
aaaagagtgccaagaattttaagagacaagtatgtaaggcctgggaaaggcttcagtgaa
ggatcaaatctcatcacacaccagagtacacacttagagaaaactcatgtttgcatggag
tgtggaaaaagcttcagtttgttttcaaatctcatcagacaccagagaacacacacagga
gagaaaccatatgtttgcagagggtgtgggcgaggcttcagtgagaaggcaaatctcatc
agacaccagagtatacacacaggggagaagcctcatatttgcagggactgtgggcgaggc
ttcattcacaagtgtcatcttatcagacaccagaggacacacacaggagaaaaaccctat
gtttgcagtgaatgtgagcgaggttttagtcggctgtgtgttctcctcaaacaccagaga
acacacacaggggagaagccatatgtttgcagagaatgtggtcgatgctttaatcaagcg
tcaaatctcatcacacacctgaagacacacacaggggagaagccccatgtttgcagggag
tgtgggcgaggctttagtcacaagtctcatctcatcagacaccagaggacacacacagag
gaaaagccttatgtttgcagtgaatga
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