Suncus etruscus (white-toothed pygmy shrew): 126013962
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Entry
126013962 CDS
T09902
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126013962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126013962
03036 Chromosome and associated proteins [BR:
setr03036
]
126013962
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
126013962
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126013962
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
126013962
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
126013962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_5
zf-C2H2_6
Zn-ribbon_8
zf-C2H2_11
zf-UBP
Zn_ribbon_SprT
zf-Di19
c-SKI_SMAD_bind
DNA_RNApol_7kD
Motif
Other DBs
NCBI-GeneID:
126013962
NCBI-ProteinID:
XP_049633145
LinkDB
All DBs
Position
7:complement(144279..179260)
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AA seq
582 aa
AA seq
DB search
MGSHRLTSCPQGLVTFPDVAMNFSPEEWACLDVSQKKLYTDVMLETYKHLQAVGYFGVKP
ALISWLEGGTLGMLPRSLFAELKSEIYPCPFCSLAFSSQNFLSHHMKRSHLLGTSARKYL
QSENSCPPDQNQCSDPYNDKPKNDILESQKHKESSIHLASRTKHGRISTVFSRLYSSQIG
SSSKQITMEKDINTGLKENPKDTVGVVPGIDLSIILRDKYVRPEQGSNNGSNLITDQMTH
TGEKPHVCRECGRGFSGRSHLIKHQSTHTGERPHVCKECGRGFSRRSHLIRHQRTHTGER
AHVCEECGRGFSRRSNLLAHQRIHTGEKPYICGECGRAFSLRSHLITHQRIHTGEKPYVC
KECGRAFNVSSHLIRHQRTHTGERPYVCKECGRGFSRRSHLIRHQRTHTEEGPYVCKECG
RDFSLRSYLIRHQRTHTGEKPYACKECGRCFSRRSNLIRHQRTHTGEGPYVCMECEHYFS
LRSDLITHQRTHTGEKPYICGECGRGFSRRSHLITHQRTDTGEKPYVCGECGHGFSMMAS
LIRHQGYTGEKPHVCRKWARLQSEVTSQKSEVTWEKPCVQIV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggggtctcaccgtctaacgtcctgtccccagggcttggtgaccttccctgatgtggcc
atgaacttctccccagaggagtgggcatgcctggatgtctctcagaagaagctctacaca
gatgtgatgctggagacctacaagcacctgcaggcagtagggtattttggggtaaaacct
gcgttaatctcctggctagaaggaggaaccctggggatgctgccacgaagcctgtttgct
gaactcaagtcagaaatctatccttgtcccttctgctctcttgccttctccagtcagaac
ttcctcagtcatcacatgaaacgaagtcatctcttgggaacatctgcaagaaagtacctt
caatcagagaattcttgtccacctgatcagaaccaatgttctgatccatataatgacaaa
cccaagaatgacatacttgaaagtcaaaagcacaaagaaagctccatacatttggctagt
aggacgaagcatggaagaatttcaacagtgttttctagactatatagcagccaaataggt
agctctagtaaacagataacaatggagaaagacattaacacaggcctgaaagaaaatcca
aaggacacagttggagtagttccagggatagacttgtcaataattttaagagataagtat
gtaaggcctgaacaaggctccaacaatggatcaaatctcatcacagatcaaatgactcac
actggggagaagccccatgtttgcagggagtgtggccgtggcttcagtgggaggtcacat
ctcatcaaacaccagagtacacacacaggggagaggccccatgtttgcaaggagtgtggg
cgtggcttcagtcggaggtcacatctcatcagacaccagagaacacacacaggggagagg
gcccatgtttgcgaggagtgtgggcgtggcttcagtcggaggtcaaatctcctcgcacac
cagagaatacacacaggagagaagccctatatttgtggagagtgtgggcgtgcattcagt
ctgaggtcacatctcattacacaccagagaatacacacaggagagaagccctatgtttgt
aaggagtgtgggcgtgcattcaatgtgagttcacatctcatcagacaccagagaacacac
acaggagagaggccctatgtttgcaaggagtgtgggcgtggcttcagtaggaggtcacat
ctcatcagacaccagagaacacacacagaagaggggccctatgtttgcaaggagtgtggg
cgtgacttcagtctgaggtcatatctcatcagacatcagagaacacacacaggagagaag
ccctatgcttgcaaggagtgtgggcgttgcttcagtcggaggtcaaatctcatcagacac
cagagaacacacacaggagaggggccctatgtttgcatggagtgtgagcattacttcagt
ctgaggtcagatctcatcacacaccagagaacacacacaggagagaagccctatatttgt
ggggagtgtgggcgtggcttcagtcggaggtcacatctcatcactcaccagagaacagac
acaggggagaagccctatgtttgtggggagtgtgggcatggcttcagcatgatggcaagt
ctcatcagacaccaaggatacacgggagagaagcctcatgtttgtaggaaatgggcaagg
cttcaatcagaggtcacatctcagaaatcagaggtaacatgggagaaaccctgtgtgcag
attgtgtag
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