Suncus etruscus (white-toothed pygmy shrew): 126018848
Help
Entry
126018848 CDS
T09902
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126018848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126018848
03036 Chromosome and associated proteins [BR:
setr03036
]
126018848
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
126018848
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126018848
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
126018848
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
126018848
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_5
zf-C2H2_6
Zn-ribbon_8
PHF5
zf-C2H2_3rep
Zn_ribbon_SprT
OSTMP1
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
126018848
NCBI-ProteinID:
XP_049636898
LinkDB
All DBs
Position
9:116235420..116246623
Genome browser
AA seq
401 aa
AA seq
DB search
MHGLLCPSLSLTQDCPSVAGYFGVKPVLITWLEGGVLGRLPRSLFAAELKPEIHPCPFCS
LTFSSHNFLSHHMKQSHPSWILLGTSARKHPQSENSYPHDENRCRQHSDPYDKPKNGILE
SQKHKESSIRSTNGRKHRRISTAFSKLLSGQIDNSSKQMTMEEDINTDLKENPKDIVGVV
PGIDLPITLRDKYVRLGQGSCDGSNLIAHQMTHTGEKPHVCRECGQGFSVKSNLIRHQTT
HTGEKPHVCKECGRGFSQKSHLITHQRTHTGEKPYSCRECGRGFNLKSNLTKHQRTHTGE
KPYICRECGHGFTWSKSLITHQRTHTGEKPYVCRECGRGFARRPHLTAHLRTHTGEKPYV
CRECGRGFARRSHLTSHQTRRHTYGKSPMFAGSVGKALDGS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcatggactgctgtgcccttcattgtctctaacccaagattgtccttctgtggcaggg
tattttggtgtgaagcctgtgctaatcacctggttagaaggaggagtcctggggaggctg
ccacgaagcctgttcgccgctgagctcaagccggaaatccatccttgtcccttctgctct
ctcaccttctccagtcataacttcctcagtcatcacatgaaacaaagtcatccctcttgg
atcctcctgggaacgtctgcaagaaagcaccctcaatcagagaattcctatccacatgat
gagaacagatgtaggcagcattctgatccatatgacaaaccaaagaatggcatacttgaa
agtcaaaagcacaaagaaagctctatacgttcgactaatggtaggaagcatagaagaatt
tcaacagccttttctaaactacttagtggtcaaatagataactctagtaaacagatgaca
atggaggaagacattaacacagacctgaaagaaaatccaaaggacattgttggagtagtt
ccagggatagacttgccaataactttaagagacaagtatgtaaggcttgggcaaggctcc
tgtgatggatcaaatcttatcgcacatcaaatgactcacacaggggagaaaccccatgtt
tgcagggagtgtggtcaaggcttcagtgtgaaatcaaatctcatcagacaccagacgaca
cacacaggggagaagccccatgtttgcaaggagtgtggacgaggctttagtcaaaagtca
catctcatcactcaccagaggacacacacgggggagaagccctattcttgcagagagtgt
gggcgaggcttcaatctgaagtcaaatctcaccaaacaccagaggacacacacaggggag
aaaccctatatttgcagggagtgtggacacggatttacttggagtaaaagtctcatcaca
caccagaggacacacacgggggagaagccctacgtttgcagagagtgtgggcgaggcttt
gctcgaaggccacatcttactgcacacctgaggacacacacaggggagaagccctatgtt
tgcagagagtgtggccgaggctttgctcgaaggtcacaccttacttcacaccagaccaga
cgacacacatatgggaaaagccctatgtttgcagggagtgtgggtaaggctttggatgga
agttaa
DBGET
integrated database retrieval system
