Suncus etruscus (white-toothed pygmy shrew): 126020239
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Entry
126020239 CDS
T09902
Name
(RefSeq) zinc finger protein 420-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126020239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126020239
03036 Chromosome and associated proteins [BR:
setr03036
]
126020239
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
126020239
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126020239
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
126020239
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
126020239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_jaz
Zn-ribbon_8
zf-C2H2_5
zf-C2H2_6
FYVE
OSTMP1
zf-Di19
Zn_ribbon_SprT
Trm112p
Motif
Other DBs
NCBI-GeneID:
126020239
NCBI-ProteinID:
XP_049637645
LinkDB
All DBs
Position
10:84410766..84459856
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AA seq
964 aa
AA seq
DB search
MAARPGSLRGSAPPRRPSATGRRRRAQTQRGRRRARREDRTGPGAPTEGRAARGASGDGP
GKMARARAQAAPAPLAPACLAAQGGFRSGFAFAFGRKPSHRHGYRHGAYADTNRTRKRHF
AVRVARTGGSGGPGRHRGPQRDGFLPAVCASVRPSVRRGAPERARRPGQVGERRGAPGWR
LQAELGPGPGNLGLLRSRLRGPPGRAQGLGRALRSVLTPAGRGNPRQASAPRCCAPAWRL
APPARSRIQCVIEGFWYIGKEGLVTFPDVAVSFSPEEWRCLDVSQRRLYRDVMLETYEHL
QAVAGHFGVKPALISWLEGGALGRLPRSLFAAELKKPEIYPCPFCSLTFSSQNFFIRHMK
RSHPSWILLETSARKHPQSETSCPHDQNQWVQHSDPYHDKPKNDILESQKHQESSILLAN
RRHERISTTSSKLCSGQIDRSSKQMTMEEDINTGPKENPKDTGGVVPRIDLPIILRDKYR
RPGQGFIDGLILITHQMTHTGEKSHVCRECGLGFCVRSSLIKHQRTHTGEKPYVCRECGQ
GFGLRSNLIRHQRTHTGEKPHVCRECGRGFSESSSLIIHKRIHTGEKPYVCRECGRGFGR
RSHLIKHQRTHTGEKPHACRDCGRGFSERSSLIRHQRTHTREKPHVCRECGRGFGRRSHL
ITHQRTHTGEKPYVCRECGQGFIQRSSLIIHQRTHTGEKPYICRFCSRAFSVRSRFIAHQ
TIHTGKKPHVCRECGQGYTMRSSLISHQTVHTGEKPYVCRECGRGFGRKSSLISHQRTHT
GEKPYVCRDCGRGFSLRSSLYKHQRIHTGEKPHVCKECGRGFSVRSSLITHQRTHTGEKP
YVCRECGRGFARNSHLITHQRTHKGEKPYVCRECGRAFRLREGFIKHQRTHTGEKPYVCR
ECGQGFCQVSNLVTHQRTHTGEKPYVCRECGQSFSQRSTLITHQKTHTGGKPYAESVGEA
SARF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggccggggtcgcttcggggcagcgcgccacccaggcggccctcggccacc
gggcggagacgccgcgcccagacccagcgcgggaggcgccgcgcccgccgggaggaccgc
accggcccgggagccccgacggagggacgagcggcgcggggagcgagcggggacgggccg
ggaaagatggcgagagcgcgagcgcaagctgcgcctgcgccgctcgcgcctgcctgcctg
gctgcccagggtggcttccggtctggctttgcttttgcttttggacggaagcccagccac
agacatggttatcgtcacggtgcttacgcagacactaaccggacccggaagcgccacttc
gccgtccgcgtggcccggaccggcggttccgggggtcccggccgtcatagggggccccag
agggacggctttctccccgccgtgtgtgcgtccgtccgtccgtccgtccgtcgaggggcc
ccggagcgcgcgcggcgtcccggccaggtgggcgagcggcggggcgccccgggatggagg
ctgcaggcggagctcggacccgggcccgggaacctggggcttctccgtagtcgtctccgg
gggccgcccgggcgggctcagggtcttggccgggctctgcgctcagtgctcactcccgcg
ggccggggaaacccgcgccaggcgagcgccccacgttgttgcgccccggcttggcgatta
gcacctccggctcgctctcgcatccagtgcgtgatcgaaggcttttggtacattgggaaa
gagggcttggtgaccttccctgatgtggctgtgagcttctccccggaggaatggcggtgc
ctagacgtctctcagaggaggctctacagggatgtgatgctggagacctatgagcacctg
caggcagtagcagggcattttggggtaaagcctgcgctaatctcctggttggaaggagga
gccctggggaggctgccacgaagcttgtttgctgcagaactcaagaagccagaaatctat
ccttgtcccttctgctctctcaccttctccagtcagaacttcttcattcgtcacatgaaa
cgaagtcatccctcttggatcctcttggaaacatctgcaagaaagcaccctcaatcagag
acttcctgtccacatgatcagaatcaatgggtacaacattctgatccatatcatgacaaa
ccaaagaatgacatacttgaaagtcaaaagcaccaagaaagctccatacttttggctaat
aggaggcatgaaagaatttcaacaacctcttctaaactctgtagtggtcaaatagatagg
tctagtaaacagatgacaatggaggaagacattaacacaggcccgaaagagaatccaaag
gacacaggtggagtagttccaaggatagacttgccaataattttaagagacaagtataga
aggcctgggcaagggttcatcgatggattaattctcatcacacatcaaatgactcacaca
ggggagaaatcccatgtttgcagggagtgtggacttggcttctgtgtgaggtcaagtctc
atcaaacatcagaggacacacacaggggagaagccgtatgtgtgcagggagtgtggacaa
ggctttggtttgaggtcaaatctcattagacaccagaggacacacacaggggagaagccc
catgtttgcagagagtgtgggcggggcttcagtgagagttcaagtctcatcatacataag
aggatacacacaggggagaaaccctatgtttgcagggagtgtggacgagggtttggtcga
aggtcacatctcatcaaacaccagaggacacacacaggagagaagccccatgcttgcagg
gattgtgggcgtggattcagtgagaggtcaagtcttatcagacaccagaggacacacaca
agggagaagccccatgtttgcagagagtgtggacgaggctttggtcgaaggtcacatctc
atcacacaccagaggacacacacaggggagaagccctatgtttgcagagaatgtgggcaa
ggtttcattcagaggtctagtcttatcatacaccagaggacacacacaggggagaaaccc
tatatttgcaggttctgtagtcgagccttcagtgttcggtcacgtttcatagcacaccag
acgatacacacaggcaagaagccacatgtttgcagggagtgtgggcaaggctatacaatg
agatcaagtctcatctcacaccagacggtacacacaggggagaagccgtatgtttgcaga
gagtgtggacgaggctttggtcggaagtcaagtctcatctcacaccagaggacacacaca
ggggagaagccctatgtttgcagagattgtggtcgaggcttcagtctgaggtcaagtctt
tacaaacaccagaggatacacacaggggagaaaccccatgtttgcaaagagtgtggtcga
ggcttcagtgtgaggtcaagtctcatcacacaccagaggacacacacaggggagaaaccc
tatgtttgcagagagtgtggacgtggctttgctcggaattcacatcttatcacacaccag
aggacacacaaaggggagaagccctatgtttgcagagaatgtggtcgagcctttcgtctg
agggaaggtttcatcaaacaccagaggacacacacaggagagaagccctatgtttgcaga
gagtgtgggcaaggattctgccaggtttcgaatctcgtgacacatcagaggacacacaca
ggggagaagccctatgtttgcagagagtgtgggcaaagctttagtcagaggtcaactctc
atcacacaccagaagacacacacaggggggaagccctatgcagagagtgtgggcgaggct
tctgccagattttga
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