Suncus etruscus (white-toothed pygmy shrew): 126020923
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Entry
126020923 CDS
T09902
Symbol
SPATA5L1
Name
(RefSeq) ribosome biogenesis protein SPATA5L1
KO
K26051
ATPase family gene 2 protein homolog B [EC:
5.6.1.10
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126020923 (SPATA5L1)
03036 Chromosome and associated proteins [BR:
setr03036
]
126020923 (SPATA5L1)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
126020923 (SPATA5L1)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
55LCC heterohexameric ATPase complex
126020923 (SPATA5L1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
55LCC heterohexameric ATPase complex
126020923 (SPATA5L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_22
AAA_14
AAA_33
AAA_lid_PRS2_C
AAA_2
Rad17
TIP49
AAA_28
TsaE
bpMoxR
NTPase_1
nSTAND3
AAA_3
RNA_helicase
AAA_18
DUF815
Viral_helicase1
AAA_7
AAA_11
ABC_tran
AAA_19
AAA_25
IstB_IS21
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
126020923
NCBI-ProteinID:
XP_049638486
LinkDB
All DBs
Position
10:89516063..89533284
Genome browser
AA seq
766 aa
AA seq
DB search
MALGAEDLPDASPVLKLLPLEAKDRGTQRCRLGPAALRALGARLGSVVKVSLPGGGSCLC
SAWPLWGGADGFVQLDARCSSPGARLEAPHGPDTLSLRCFQAVACPPLRRLSVWPEWREG
RAPPGGPASPAALEAARALLSLRPVGLGLVLAAPPDAPGPLAALHVVGGAPRPDPAGLVT
PRTVVAFSPAPPASPAPSLDLPLGGLADAARALRDLLLLPLRYPRTLASLGLAVPRGVLL
SGPPGVGKTRLVRAVARETGAELLAVSAPSLQGSRPGETEENVRRAFLRAEELARRRPTV
LFLDEVDALCPRRGGAHRAPETRAVAQVLTLMDGIGGPRRLVVVGATNRPDALDPALRRP
GRFDREVVIGTPTLKQRKEILQVVTSKMPLSNEVDLSLIAEMAVGFVGADLSALCREVAM
NALHRSEKDNAMIDQTDFLEAFKKIQPSSFRSIIGLTDVNPIDWEQIGGLEDVKLKLKQS
VEWPLKFPQEFVRMGLTQPKGILLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFV
GDSERALSQVFQQARANTPAIVFLDEIDSIVGSRSISKTKCGVQERVLSVLLNELDGIGF
KTTERRGNKSDQSGKVRELMKNSSLESQELFHRNVMVVAATNRPEMIDDALLRPGRIDKV
IYIPPPDEKGRLSILKICTKNMPLDFDVSLEKLAEETLLFSGADLGNFCKEAALLALQEN
GLEATNVKQEHFQKSLTIVKPSLCHKDLILYEKLFQRQEFSNLKQI
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctctcggtgctgaggatcttcccgacgcgtcgcccgttttgaagctgctgccgttg
gaggcgaaagacagaggcactcagcgctgtcgcctgggcccggccgccttgcgcgccttg
ggcgcgcgcctgggctccgtggtgaaggtgtcgctgcccgggggcggctcctgcctgtgc
agcgcctggcccctgtggggcggcgccgacggcttcgtgcagctggacgcgcgctgctcg
agcccgggcgcccgcctggaggcgccccacggccccgacacgctcagcctgcgctgcttc
caggccgtcgcctgcccgccgctccggcgcctcagcgtgtggcccgagtggcgggaaggc
cgcgcgccccccggcggccccgcttccccggcggccctggaggcggcgcgggcgctgctg
agcctccgccccgtcggcctcggcctggtgctcgcggcccctcccgacgccccgggcccc
ctggcggccctgcacgtcgtcggcggcgccccgcgccccgacccggccggcctcgtgacg
ccgcgcaccgtcgtagccttcagccccgcgccgcccgcgagccccgcgccgagcctcgac
ctgcccctgggcggcctggccgacgcggcccgcgcgctgcgggacctgctgctcctgccc
ctgcgctacccgcgcacgctggcctccctgggcctcgccgtgcctcgcggggtgctgctc
tcgggcccccccggcgtcggcaagacgcgcctggtgcgggccgtggcgcgggagacgggc
gccgagctgctggccgtgagcgccccgtcgctgcagggctcccggcccggggagacggag
gagaacgtgaggcgcgccttcctgcgggccgaggagctggcccggcggcgccccaccgtg
ctcttcctggacgaggtggacgccttgtgtccccggcgtggcggcgcccaccgcgccccc
gagacccgcgcggtggcccaagtgttgacgctgatggacggcatcggggggccccgccgg
ctggtggtcgtgggagccacgaaccggcccgacgcgctcgacccggcgctgcgcaggccc
gggaggtttgaccgggaggttgtcattgggactcccacgcttaaacaacggaaggagatt
ctacaagtggtcacctccaagatgcctctctccaatgaagttgatttgagcctcattgca
gaaatggccgttggctttgttggtgcagacctctctgcactctgcagggaggttgccatg
aatgcactacatcggagtgagaaggacaatgctatgattgatcaaacagacttccttgaa
gcttttaaaaagattcaaccctcatcgtttcgaagtatcattggactgacagatgtcaac
cctattgactgggagcagattggtggccttgaagatgtcaaactgaagttaaaacagagc
gtcgaatggcctcttaaattcccgcaagaatttgttaggatgggtctgacacaaccaaaa
ggaatcctcctgtatggcccccctggatgtgctaaaaccaccttggtgagagccctggcc
acaagctgtcactgctctttcgtttcagtgagtggagctgatctcttttcaccttttgtt
ggagattcagaaagagccttatctcaggtatttcaacaagcaagagcaaatactccagca
attgtatttttggatgaaatcgattcgatagtggggtctcggtcaatcagcaaaacaaaa
tgcggcgttcaagagcgtgttctttctgttctcttgaatgaattagatggtattggattt
aagactactgagagaagaggaaataaatcagatcaatcaggtaaggtaagggagctgatg
aaaaattcctccttagagtctcaggagctatttcatcgaaatgtcatggttgttgcagca
acaaatagacctgagatgatagatgatgctttgctgcgacctgggaggatagataaggtt
atatatattccacctcccgatgaaaagggccggctatccattttaaaaatctgcaccaaa
aacatgcctctggactttgatgtgtctttggagaaactggcggaagaaaccttattattc
tctggagctgatcttggaaacttctgcaaagaagccgctttgctggctctgcaagaaaat
ggactagaggcaaccaacgtgaaacaggagcactttcaaaaatcactgacgattgtaaag
ccatccttatgtcacaaagacttgattttgtatgaaaaattatttcagaggcaagaattt
tctaatttaaagcagatttaa
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