KEGG   Suncus etruscus (white-toothed pygmy shrew): 126025844
Entry
126025844         CDS       T09902                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03020  RNA polymerase
setr03420  Nucleotide excision repair
setr04623  Cytosolic DNA-sensing pathway
setr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126025844
  09124 Replication and repair
   03420 Nucleotide excision repair
    126025844
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    126025844
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    126025844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:setr03021]
    126025844
   03400 DNA repair and recombination proteins [BR:setr03400]
    126025844
Transcription machinery [BR:setr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     126025844
  RNA polymerase III system
   RNA polymerase III
     126025844
  RNA polymerase I system
   RNA polymerase I
     126025844
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126025844
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 126025844
NCBI-ProteinID: XP_049641545
LinkDB
Position
13:complement(74238349..74238777)
AA seq 125 aa
MVHPSFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQMRITTPYMTKYER
ARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDE
LIITD
NT seq 378 nt   +upstreamnt  +downstreamnt
atggtccatcctagcttcgatggagacgactttgatgatgtggaggaggacgagggcctc
gatgacctggagaatgccgaggaggagggccaggagaacgtggagatcctcccatccggc
gagcgccctcaggccaaccagatgcgcatcaccacgccttatatgaccaagtacgagcgt
gcccgcgtgctgggcacccgcgccctgcagattgcgatgtgtgcccccgtgatggtggag
ctggagggggagaccgaccccttgctcattgccatgaaggaactcaaggcccgcaagatt
cccatcatcatccgccgctacctgccggacgggagctacgaagactggggcgtggatgaa
ctcatcattactgactga

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