KEGG   Suncus etruscus (white-toothed pygmy shrew): 126027194
Entry
126027194         CDS       T09902                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    126027194 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:setr01009]
    126027194 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setr03400]
    126027194 (PNKP)
Enzymes [BR:setr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     126027194 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     126027194 (PNKP)
Protein phosphatases and associated proteins [BR:setr01009]
 HAD phosphatases
  Other HAD phosphatases
   126027194 (PNKP)
DNA repair and recombination proteins [BR:setr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     126027194 (PNKP)
Motif
Pfam: PNK3P FHA_2 AAA_33 Trypan_PARP Hydrolase Hydrolase_6 HAD_2 Zeta_toxin AAA_25
Other DBs
NCBI-GeneID: 126027194
NCBI-ProteinID: XP_049642145
EnsemblRapid: ENSSRTG00000033949
LinkDB
Position
14:complement(93026130..93029978)
AA seq 534 aa
MADVEAPGRLWLESPPGGPPPIFLPSDGQALVLGRGPLTRVTDRKCSREQVELVADPHTR
TVTVKQLGVNSATAGTQVLKPDASGALRVGDTLYLVNGLYPLTLRWGDGASNGVQPDPQP
APKKKKEKEVEPEPKPEPEPEPEPEPEPPSKRARTAAPGWVSLDKLLVFTAAGVEARGKV
AAFDLDGTLICTRSGKVFSTGPNDWKILYPEIPKKLQELQADGYKLVIFTNQMGIGRGKV
TAKEFQAKMEAVLRELRVPFQVLVATHAGLYRKPVTGMWDYFCEQANEGVQVSLESSIFV
GDAAGRPALWAPDRKKKDFSCADRLFALNLGLPFATPEEFFLKWPAAAFELPAFDPRTVS
SSGPLWLPESSSLLSPDPEVVVTVGYPGAGKSTFTQEHLVSAGYVYVNRDTLGTWQRCVA
ACEAALKQKKRVVVDNTNPDVQTRARYIKCAQDAGVPCRCFVFGASLEQARHNNRFREMT
DSKHSHVADMVMYSYRKQFKAPTLAEGFTAILDIPFRLRLKPQLERLYCQFSEG
NT seq 1605 nt   +upstreamnt  +downstreamnt
atggcggacgtcgaagccccgggccggctgtggctggagagcccccccggagggccgccc
cccatcttcctgccctcggacggccaagccctggtcctcggccggggccccctgacccgg
gtgaccgatcggaagtgctctcgagaacaagtggagctggtcgcagacccgcacacccgg
accgtgaccgtgaagcagctgggcgtcaactccgccaccgccgggacccaggtgctgaag
ccggacgcgtcgggcgccctgcgggtgggggacacgttgtatctggtcaacggcctctac
cccctgaccctccgctggggagatggcgcctctaacggggtgcagcccgacccccagccg
gctccaaagaagaagaaggagaaggaggtggagccggagccaaagccggagccggagccg
gagccagagccggagccagagccgccgagcaagcgggcccggacggcagcccctggctgg
gtcagcctggacaagctgctggtgttcaccgctgcaggcgtggaggcccgcggcaaggtg
gcggcctttgacctggacgggaccctcatctgcacccgcagcgggaaggttttctccacg
ggccccaacgactggaagatcctgtaccccgagatcccgaagaagctccaggagctgcag
gctgacggctacaagctggtgatcttcaccaaccagatgggcatcggccgcgggaaggtg
acagcaaaggagttccaggccaagatggaggcggtgctgcgggagctccgggtccccttc
caggtgctagtggccactcatgctggcctgtaccggaagccggtgaccggcatgtgggac
tacttctgcgaacaggccaacgagggagtgcaagtgtccctggagagcagcatctttgtg
ggagacgctgccgggagaccagccctgtgggcccctgatcggaagaagaaggatttctcc
tgcgctgaccgcctgtttgccctcaacctgggcctgccctttgccacaccggaggaattc
ttcctcaagtggcctgcagctgccttcgagctcccagcctttgacccgaggaccgtgtcc
tcgtcgggcccactctggctccccgagtccagctccctcctgagccccgacccggaggtg
gtggtcaccgtgggatacccgggggctgggaagtccaccttcacccaggaacacctcgtg
tctgccggctacgtctacgtgaacagggacaccctgggcacctggcagcgctgcgtggcc
gcctgtgaggctgccctcaagcagaagaaacgggtggtcgtggacaacaccaaccctgac
gtccagaccagagccaggtacatcaagtgtgcccaggacgcaggcgtgccctgccgctgc
ttcgtcttcggcgccagcctggagcaggcgcgccacaacaaccggttccgagagatgaca
gactccaagcattcccacgtggcggatatggtcatgtacagctacaggaagcagttcaag
gcccccacgctggccgaaggcttcacagccatcctggacatccccttccgcctgcgcctg
aagccccagctcgagcggctgtattgccagttctccgagggctga

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