Suncus etruscus (white-toothed pygmy shrew): 126032414
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Entry
126032414 CDS
T09902
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00310
Lysine degradation
setr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
126032414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126032414
03036 Chromosome and associated proteins [BR:
setr03036
]
126032414
Enzymes [BR:
setr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
126032414
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126032414
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
126032414
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
126032414
BRITE hierarchy
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
KRAB
zf-C2H2_6
SSXRD
zf-C2H2_jaz
zf-C2H2_5
zf-C2H2_11
SET
Zn-ribbon_8
zf-Di19
Motif
Other DBs
NCBI-GeneID:
126032414
NCBI-ProteinID:
XP_049646044
EnsemblRapid:
ENSSRTG00000013257
LinkDB
All DBs
Position
16:complement(87390653..87437903)
Genome browser
AA seq
836 aa
AA seq
DB search
MFAGLSAKGLAAALLEESKMEKMGPHCLVSYPQDMVTFPDVFVSFSPEEWPFLDISQRKL
YREVMLETYEHLQDIGHCRVKPALISWLEGGALGRLPRDTFAVKSPWMTFRVEQSRQQKE
MARTPVSNESSSKELSGTGNLLKTSGSQQAQKPPTPLGKASPFGQDSKPKLELRRKEPEV
KIYSLRERKGHAYQEFGRLQDDDYLYCENCQNYFIDKCSVHGPPIFVKDRAVAKGHCNRS
ALTLPHGLRIGQSGIPEAGLGVWNEISDLPVGLHFGPYEGQITDTEEAANSVYSWLITKG
KNCYEYVDGTDESLANWMRYVKCAREDVEQNLVAFQYHGQIFYRTCRIIKPGCELLVWYG
DEYGQELGIKWGSKWKSEFRADKAETTPESNPCPFCSLNFSSQNFLSRHMKQSHSSRILP
GTSARKHPQLENFCPHDQNQLQQCSDSYNDKFDKIRSAQLESQKHKESSIALSKKIKHKI
ILRAFSSLSSNQIGCSNKPKMTLEEKTNTGQKENPEYTRLVAGKGMPRILRGKYLRPGRG
FSDGSNLITHQRTQTMEKPYVCRDCERGFSQRSHLTRHQRTHTGEKPYICRECGRGFSLR
SSLITHQRTHTGEKPHICRQCGRGFSYSSDLIRHQRTHTGEKPYVCRECGRGFVRSSNLI
RHQRTHTGEKPYVCRDCGRGFSLRSNLIKHQSIHTGEKPYVCSECGRSFSLRSNLIIHKR
THTGEKPCVCRECGRGFSWSSDLIRHQRTHTGEKRYVCRECGRGFVRSSNLITHLRTHTG
EKPYVCRECGRSFSLGSNLITHQRTHTGEKPYVCRECGRGFSLRSNLLTHQRTHTG
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaggactttctgcaaagggccttgctgctgctcttctggaagaatccaagatg
gagaagatggggccacactgtctggtatcctatccccaggacatggtaaccttccctgat
gtgttcgtaagcttctccccagaggagtggccattcctggatatctctcagaggaagctc
tacagagaagtgatgctggagacctatgagcacctgcaggatatagggcattgcagggtg
aagcctgcgctgatctcttggttggaaggaggagcccttgggagactgccgagagacacg
tttgcagtcaaatctccttggatgactttcagagtggagcagagtagacagcaaaaggaa
atggccagaacaccagtaagtaatgaatctagctcaaaggaattatcaggcacaggtaat
ctgctgaagacgagtggctcacagcaagcccagaaaccaccaacacctcttggaaaagca
agtccctttggacaagactctaaaccaaaactggaactcagaagaaaggagccagaggtg
aagatatatagcttaagagaaagaaagggccatgcatatcaggagttcggcaggctccag
gatgatgattacctatattgtgagaactgtcagaactacttcatcgacaaatgctctgtt
catggacctcctatatttgtaaaggacagagcagtagcaaagggccattgtaaccgttca
gccctcactctgccacatgggttgagaatcggacaatcaggcatccctgaggctggactt
ggagtgtggaatgagatatctgacttgccagtgggtttgcactttggcccatatgagggc
cagatcacagacactgaagaggcagccaacagtgtgtactcctggctgatcaccaagggg
aaaaattgctatgagtatgtggatggaacagatgaatctttggcaaattggatgaggtat
gtgaaatgtgccagagaggatgtggagcagaacctcgtggcctttcagtatcatgggcag
atcttttaccgaacctgccgtatcatcaagccaggctgtgaactcttggtctggtatgga
gacgagtatggccaggaactgggcatcaagtggggcagcaagtggaagagtgaattcaga
gcagataaagcagaaacaaccccagaaagcaatccatgtcccttctgctcactcaacttc
tccagtcagaacttcctcagtcgccacatgaaacaaagtcattcctctcggatcctccca
ggaacatctgcaagaaagcaccctcaattagagaatttctgtccacatgatcaaaatcag
ctgcagcaatgctctgattcatataatgacaaatttgacaaaataagaagtgcccaactt
gaaagtcagaagcacaaagaaagctcaatagctttgtcgaagaagataaagcataaaata
attttaagagccttttctagcctatctagcaatcaaataggatgctctaataaacctaag
atgacactggaagaaaaaactaacacaggtcagaaagaaaatccagagtacacaagacta
gttgcagggaaaggaatgccaagaattttaagaggcaagtacttaaggccagggagaggc
ttcagtgatggatcaaatctcatcacacatcagaggactcaaacaatggagaaaccctat
gtttgcagagactgtgagcgaggcttcagtcagaggtcacatctcacaagacaccagagg
acacacacaggggagaagccttacatttgcagggagtgtgggcgaggcttcagtctgagg
tcaagtctcatcacacaccagaggacacacacaggggagaagccccatatttgcaggcaa
tgtgggcgaggcttcagttatagttcagatcttatcagacaccagagaacacacacaggg
gagaagccctatgtttgcagggagtgtgggcgaggcttcgttcggagttcaaatcttatc
agacaccagaggacacacacaggagagaagccttatgtttgtagggactgtgggcgaggt
ttcagtctgaggtcaaatctcatcaaacaccagagcatacacacaggagagaagccctat
gtttgcagtgagtgtgggcgaagctttagtctgaggtcaaatcttatcatacacaagagg
acacacacaggggagaagccctgtgtttgtagggaatgtgggcgaggcttcagttggagt
tctgatctcatcagacaccaaaggacacacacaggggagaagcgctatgtttgcagggag
tgtgggcgaggctttgttcggagttcaaatctcatcacacacctaaggacacacacaggg
gagaagccctatgtttgcagggagtgtgggcgaagcttcagtctggggtcaaatctcatc
acacaccagaggacacacacaggggagaaaccctatgtttgtagggagtgtggacgaggc
ttcagtctgaggtcaaatctccttacacaccagaggacacatacagggtag
DBGET
integrated database retrieval system
