Shewanella eurypsychrophilus: FM038_000095
Help
Entry
FM038_000095 CDS
T07746
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00071
Fatty acid degradation
seur00280
Valine, leucine and isoleucine degradation
seur00310
Lysine degradation
seur00362
Benzoate degradation
seur00380
Tryptophan metabolism
seur00410
beta-Alanine metabolism
seur00640
Propanoate metabolism
seur00650
Butanoate metabolism
seur00907
Pinene, camphor and geraniol degradation
seur00930
Caprolactam degradation
seur01100
Metabolic pathways
seur01110
Biosynthesis of secondary metabolites
seur01120
Microbial metabolism in diverse environments
seur01200
Carbon metabolism
seur01212
Fatty acid metabolism
Module
seur_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FM038_000095 (fadB)
00650 Butanoate metabolism
FM038_000095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FM038_000095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FM038_000095 (fadB)
00310 Lysine degradation
FM038_000095 (fadB)
00380 Tryptophan metabolism
FM038_000095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FM038_000095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FM038_000095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FM038_000095 (fadB)
00930 Caprolactam degradation
FM038_000095 (fadB)
Enzymes [BR:
seur01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FM038_000095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FM038_000095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FM038_000095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FM038_000095 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QPG56011
UniProt:
A0A7S9IUT8
LinkDB
All DBs
Position
complement(22100..24253)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAPGSVNKLDRETIDSLNAALDAIKQNSDIQGLVLSSG
KSAFIVGADITEFLGLFAQDDSVLLPWIAEANVVFNKIEDLPFPTISAINGFALGGGFET
VLATDFRIADTSARVGLPESKLGLVPGFGGTVRLPRLIGTDNALEWITGGKDQRPDAALK
VGAIDAIVAPENLQASAIQMLKDAIVEKLDWQTRRARKQAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMTAISVIEQAANLSRDEALKIEHQAFVKLAKTDVAQALIGIFLNDQLVK
GKAKKAAKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLGEASKLL
AAQIKRGRSTPEKMAKVLNNITATLDYTPVKDVDVVVEAVVEHPKVKSMVLAEVEQHVAD
DAIITSNTSTISINLLAKALKKPERFCGMHFFNPVHKMPLVEIIRGENSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDIMFDAERFGQKNSKGFYTYSVDRRGKP
KKDVDAVSYELLGAEFGELKQFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQSK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaggttgagttacttgaagacaatatcgctcggctc
tgctttaacgcaccgggttcagtcaacaagctagatagagaaacaattgattctctcaat
gctgcactcgatgcaatcaaacaaaattcagacattcaaggtttagtcctatcctctggt
aaaagtgctttcatcgttggcgcagatattactgagttccttggccttttcgctcaagat
gacagcgtactgttaccttggatagctgaagcgaatgttgtttttaacaagattgaagat
ctgccgttccccactatctcggccatcaatggctttgcactaggcggcggtttcgaaact
gtgcttgcaaccgatttccgtattgctgataccagtgcacgcgtcggtcttcctgaatct
aagcttggcttagtgcctggctttggtggcacggttcgccttccacgtcttatcggtaca
gataatgctctcgagtggatcactggcggtaaagatcagcgtccagatgcagcacttaaa
gtcggcgctatcgacgctatcgtcgcaccagaaaatttacaagcttctgcgattcagatg
ctcaaggatgccatcgtagaaaagctcgattggcagactcgccgtgctcgcaagcaggca
ccactgacactacctaagctagaagctatgatgtcattcgctacggcgaaaggcatggtc
ttcaagatagcaggcaagcattacccagcacctatgacagccatcagcgtcatagagcaa
gccgctaacctcagtagagatgaagcacttaagatagaacatcaagcttttgttaagcta
gccaagacagatgtggctcaggcattgatcggtatattccttaatgaccagttagtcaaa
ggcaaggctaagaaggccgctaaactggctaagaaagttgacactgcagccgttcttggt
gcaggcatcatgggtggcggcatcgcctaccagagtgccagcaagggcacgcctatcgtc
atgaaggatatcgcacagccggctctagagttaggccttggtgaagcatctaagcttctt
gctgcacagattaaacgtggccgctcaacacctgagaagatggctaaggtgcttaacaac
atcacagcgactctagactacactccagttaaagatgtcgatgttgtcgtcgaagccgtt
gtcgaacatcctaaggtcaagtctatggtactggccgaagttgagcagcatgttgccgac
gacgccatcatcacctctaatacatcgactatctcgatcaacctactggctaaagccctt
aagaaacctgaacgtttctgtggcatgcacttcttcaacccggtacataagatgccactg
gttgaaattattcgtggtgagaacagctcagaagagactatcgcgactgtcgttgcttac
gctagcaagatgggcaaaacccctatcgtagtcaatgactgccctggcttctttgttaac
cgcgtgctgttcccttacttcgcaggctttagcgggctgcttgcagatggcgctgatttc
gccgctatcgataaagtgatggagaagcagttcggttggcctatgggccccgcatacttg
cttgatgttgtcggtctagatactggccatcacgcacaagcagttatggctgaaggtttc
cctgatcgcatggcgaaagaaggcaaagatgctatcgatatcatgttcgatgcagagcgc
ttcggtcagaagaatagcaaaggtttctatacttactcggtcgaccgtcgtggtaagcca
aagaaagatgtcgatgcagtgagctatgaactgctaggtgccgaattcggtgagcttaag
caattcgaatcagatgagatcatcgcccgcactatgatccctatgatcatcgaaaccgtg
cgctgtctcgaggaaggcataatcgcttcacctgctgaagccgatatgggtctggtttac
ggtctaggtttcccaccattccgaggtggtgtattccgttacatagataccatgggcgta
gcaaacttcgttgcgcttgccgataaatatgctcacttaggtggcctatatcaagtaaca
gatgccatgcgtgaacttgccgcaaataatggcagctactaccagtctaaataa
DBGET
integrated database retrieval system
