Shewanella eurypsychrophilus: FM038_018175
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Entry
FM038_018175 CDS
T07746
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
seur
Shewanella eurypsychrophilus
Pathway
seur00730
Thiamine metabolism
seur01100
Metabolic pathways
seur01240
Biosynthesis of cofactors
seur04122
Sulfur relay system
Module
seur_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
seur00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FM038_018175 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
FM038_018175 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seur03016
]
FM038_018175 (thiI)
Enzymes [BR:
seur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
FM038_018175 (thiI)
Transfer RNA biogenesis [BR:
seur03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FM038_018175 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Rttp106-like_middle
Motif
Other DBs
NCBI-ProteinID:
QPG59116
UniProt:
A0A549ZY42
LinkDB
All DBs
Position
complement(4283736..4285190)
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AA seq
484 aa
AA seq
DB search
MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLKKVDESAKVKRDWDKIMVMVPSDRPD
LVEAFGERLACIPGIAHILQVNESTFESVDDIYQQTLVQYKDQLAGKTFCVRVKRSGQHE
FKSIEVERYVGGGLNQFTEAKGVKLKNPDLTINLEIDRENLYLVVNRIPGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISVPFDPVVTEILERIDNGQMGVILKRMMMRAAAKIARKMGIQALVTGEAMGQVSSQTL
TNLNVIDRCTDQLILRPLIAMDKQDIINISRKIGTEDFAKSIPEYCGVISQKPTVKAVLS
KVESEEEKFSEGLIDSIVEAAVVIDIREIAKSVDKQIASTETVNVIDHNEVIIDVRSPEE
EERDPLVVEGVEVKAIPFFRLATQFTELAKDKTYLLYCDRGVMSKLQALYLQEQGYENVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactgttccctgaaatcatgatgaaaagtaaaccggtaagaatg
cgttttaccaaaatgcttgaaaccaatattcgcaacgtacttaagaaagtcgatgaaagt
gctaaggttaagcgagattgggataagatcatggtgatggtgccaagcgatagacccgat
ctggttgaagcctttggtgagcggttagcgtgtatacctgggatcgcccacatattgcaa
gttaacgaaagcacctttgaatcagttgacgatatttatcagcagacgttagtacaatat
aaagatcaacttgctggaaagaccttctgtgtgcgtgttaaaagatcgggacagcatgaa
tttaagtccattgaagttgagcgttatgttggtggtggattaaatcaatttactgaggct
aaaggcgtaaagcttaaaaatccagatctgaccattaacttagagatagatagagaaaac
ctgtatctcgtggttaaccgtattccaggactaggtggcttccctatggcgactcaggaa
gatgtactttcacttatctctggtggttttgactctggtgtctctagctatcagtttatc
aagcgtggttcgcgtactcattactgtttctttaacctaggtggcgatcaacatgagata
ggcgttaagcaggttgcttatcatctatggcagaaatatggtgagtcgcacaaggtgaag
tttatctcagtgccgttcgatcctgtggtaaccgaaattttggaaagaattgataacggc
caaatgggcgttattctcaagcgtatgatgatgagagccgcagcaaaaattgctagaaaa
atgggtattcaagcgctcgtgactggtgaggcgatgggacaggtgtctagccagacgttg
actaaccttaatgtcattgaccgctgtactgatcaacttatacttcgtccattaattgct
atggataaacaagatatcattaatatcagtcgcaagattggcacggaagattttgccaag
tcgattcctgaatattgtggcgttatttcgcaaaagccaacggtaaaagcggtactctct
aaagtcgagtctgaagaggagaagttttctgaagggctgattgacagtattgtagaagcc
gctgtagtgatcgatattcgtgaaatagccaagagtgtagataaacaaatagcatcgact
gaaactgtcaatgttatcgatcataatgaagtcattattgatgtgagatcgcctgaggaa
gaggagcgtgatccgctcgttgttgagggcgttgaagttaaagccattcctttctttaga
ttggcgactcaatttaccgaacttgccaaagacaagacttacctcctctattgtgaccgt
ggtgtgatgagtaagcttcaagcactttacctgcaagagcagggctatgaaaacgtgaag
gtctaccgtccttaa
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