KEGG   Sinorhizobium fredii USDA 257: USDA257_c09330
Entry
USDA257_c09330    CDS       T02188                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sfd  Sinorhizobium fredii USDA 257
Pathway
sfd00740  Riboflavin metabolism
sfd01100  Metabolic pathways
sfd01110  Biosynthesis of secondary metabolites
sfd01240  Biosynthesis of cofactors
sfd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sfd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    USDA257_c09330 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    USDA257_c09330 (ribD)
Enzymes [BR:sfd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     USDA257_c09330 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     USDA257_c09330 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AFL49525
UniProt: I3X0W9
LinkDB
Position
976822..977925
AA seq 367 aa
MGGPTREDERFMAAALRLARRNLGLTSTNPSVGCLVVKDGTIVGRAVTAPSGRPHAESQA
LADAGEKARGATVYVTLEPCSHHGKTPPCADALIASGVARVVVCLLDPDERVAGRGVVML
RDAGIGVDIGVLRDEGERVLEAYLMRQRMKRPHVTLKLAVSADGMIGRKGEGQLRITGAV
SRAQVQVLRAETDAILVGAGTANADDPELTVRLPGLEARSPIRIVLDRRLDLTVESKLVR
SAGAVPLIAVADSVLDRAATARRSALEEAGVEVLNADTVADLLTALASRGISSLLVEGGA
RAARQFLDAGLVDRILLYNGPATIGADGIRSPFGRTTVPAGFSLKRTARYGDDIFDDYER
DTGCSQA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgggcgggccgacgcgtgaggacgagagattcatggcggcggcattgcgcctcgcccgc
cgcaatctcggtctgacctccaccaatccctccgtcggctgtcttgtcgtcaaggacgga
acgattgtcggccgagcggtgacggcgccaagcggacgcccgcatgcggaatcgcaggct
cttgccgacgcaggtgagaaggcgaggggggcgaccgtctatgtcaccctcgaaccctgt
tcgcatcatggcaagacgccgccctgtgccgacgcgcttatcgcctcgggcgtcgcccgc
gtcgtcgtttgccttctggacccagacgagcgcgtggccggtcgcggggtcgtgatgctc
cgcgacgccggcatcggagtcgacatcggtgtccttcgcgacgagggcgagagggtgctg
gaagcttatcttatgcgccagcggatgaagcggccgcatgtcaccctcaagctcgccgtc
tcggccgacggcatgatcggacgaaagggtgaagggcagctgaggatcaccggtgcggtc
tcgcgcgcccaggtccaggtgctgcgtgccgagacggatgccatcctcgtcggggccggt
acggcaaatgccgacgatccggaactcaccgttcggttacctgggcttgaagcgcgttcg
ccaatccgtatcgtccttgatcgacgtctagacttgacggtcgaatcgaagctcgtccgc
tcggccggtgcggtcccattgatcgccgtcgcagattcggtgctcgatcgggccgcaaca
gcgaggcgcagcgcgctggaagaagccggcgtcgaagtgttgaatgccgataccgttgcc
gatcttttgacggcactggcctcgcgcggcatttcctcgcttctggtcgaaggcggcgcg
cgggcggcgcgccagtttctcgatgcggggctggtcgatcgaattctgctgtacaacggg
ccggcgactattggcgcagacggcatccgatccccatttggtcggacgaccgtacccgcc
gggttttcgctcaagcgtacggcccgttacggcgatgatattttcgacgattacgaaaga
gataccggatgttcacaggcataa

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