Sinorhizobium fredii USDA 257: USDA257_c09800
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Entry
USDA257_c09800 CDS
T02188
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase FAD-binding subunit XdhB
KO
K13481
xanthine dehydrogenase small subunit [EC:
1.17.1.4
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00230
Purine metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01232
Nucleotide metabolism
Module
sfd_M00958
Adenine ribonucleotide degradation, AMP => Urate
sfd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
USDA257_c09800 (xdhB)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
USDA257_c09800 (xdhB)
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Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Fer2_2
Fer2
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AFL49572
UniProt:
I3X116
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Position
1020931..1022412
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AA seq
493 aa
AA seq
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MTIEIRNTIRFLLNDRLVELADVSPVQTLLDFLRIGRNLRGTKEGCAEGDCGACTVLVGR
LYDGGLKYESVNACIRFVASLDGCHVVTVEALAQSGGPLHPVQQAIVDTHASQCGFCTPG
FVMSLYGLWMENPRPCIQEIEKALQGNLCRCTGYAAIIRAAEAISSIGEVGKDPLVSERE
KIVRQLADLRDGYRVELGSEDERVVLPASLDDFAAVLDANPKATIVAGSTDVGLWVTKFM
RDIAPVVHLSHLEELRRISVDDGGITLAAGVSYTEAYPVIIRHFPQLRELWDRIGGAQVR
NMGTIGGNIANGSPIGDTPPALIALGASVTLRKGGERRTLPLESFFIAYGRQDRQPGEFV
ESVRIPFLGKADRFAVYKVSKRLDEDISSVCGAFRVRLDGEGRVADTTIAFGGMAGTPKR
ASNVEAVLKGAVWNETAVSAAVIVFEQDFTPLSDWRASADYRMLVAKNLLRRFHLETQDT
RNVRVDRTVAVAV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaaatccgcaacaccatccgcttcctcttgaacgaccggctggtcgagctt
gccgatgtctcgcccgtccagacgctgctcgattttctgcgcatcggccgcaatctgcgc
ggcaccaaggaaggctgtgcggaaggggactgcggtgcctgtacggtgcttgtcggccgc
ctttacgacggcgggctgaaatacgaatccgtcaacgcctgcatccgattcgtcgcctcc
ctcgatggctgtcatgtcgtcacggtcgaggcgctcgcccaatccggcgggccgctccat
cccgtgcagcaggccatcgtcgacacgcacgcctcgcaatgcggcttctgcacgccgggt
ttcgtcatgtcgctttacggcctctggatggaaaaccccaggccttgcatccaggaaatc
gaaaaggccctgcagggcaatctctgtcgttgcaccggttatgccgcaatcatccgcgcc
gctgaggcgatttcgtcgatcggcgaggtcggcaaggacccgctggtgtccgaacgcgag
aagatcgtgcgccagctcgctgacctcagggacggctaccgcgtcgagctcggcagcgag
gacgaacgcgtggtgctgccggcttcgctggatgatttcgccgcagtcctcgacgccaat
ccaaaggcaacgatcgtcgcaggctccaccgatgtcgggctgtgggtgacgaagttcatg
cgcgacatcgcgccggtcgttcacctttcccacctggaggagctgcgccggatttccgtc
gatgatggcggcatcacgctcgccgccggggtgagctacaccgaagcctatccggtgatc
atccggcatttcccgcaactgcgcgagctctgggaccggatcggcggcgcgcaggtgcgc
aatatggggaccatcggcggcaatatcgccaacggctcgccgatcggcgatacgcccccg
gcgctgattgcgcttggagcgtctgtgacgttgcgcaagggcggggaacgacggacgctg
ccgctcgagtccttcttcatcgcctatggaaggcaggatcgccagcccggcgaattcgtc
gagtccgtccggattccattcttgggcaaggccgaccgtttcgccgtctacaaggtttcg
aagcggctcgacgaggatatttcctccgtctgcggtgctttccgtgtgaggctcgacggc
gaaggccgggtcgcggatacgacgatcgccttcggcggcatggccggcacgccgaagcgc
gcatcgaatgtcgaggccgtgctcaagggggcggtctggaacgaaacggcggtcagcgct
gccgtcatcgtcttcgagcaggatttcacgcctttgagcgactggcgcgcctcggcggac
taccggatgcttgtcgccaagaacctcctgcggcggttccacttggaaacgcaggacaca
agaaatgtccgtgtcgaccgcacagtcgcggtggctgtctag
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