Sinorhizobium fredii USDA 257: USDA257_c09990
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Entry
USDA257_c09990 CDS
T02188
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase DeoC
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00030
Pentose phosphate pathway
sfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
USDA257_c09990 (deoC)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
USDA257_c09990 (deoC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
AFL49590
UniProt:
I3X134
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All DBs
Position
1047475..1048488
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AA seq
337 aa
AA seq
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MEDLAVNGVSAVSAQPAGAGHNWPRNDGVDLDLSWVLDQRVNLSAAERRVATLPGRRTVK
KDAQAAWLLKAVTCIDLTTLNGDDTTERVKRLCAKARRPVRQDLLDALGMGDRDITTGAI
CVYHRFVSTAVDALEGSGIPVAAVSTGFPAGLIRHDVKLKEIEASVADGAREIDIVITRE
HVLTGNWQALYDEMRDFRDACGDAHVKAILATGDLKTLRNVARASLVCMMAGADFIKTST
GKEGVNATLLVTLVMLRMIRAYQERTGIKVGYKPAGGISGAKDVLNYQFLMKEELGREWL
EPDLFRIGASSLLADIERQLEHHVSGAYSALNRHPIG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaccttgctgtgaacggggtgtcggcagtttctgcccaacccgctggcgccggt
cacaactggccgcgcaacgacggtgtcgatctcgacctttcctgggtgctcgatcagcgc
gtcaatctttccgccgccgagcggcgggtcgcgacgctgccgggtcgccggaccgtgaaa
aaggatgcgcaggccgcttggctcttgaaggcggtcacctgcatcgatctgacgacgctc
aatggcgacgatacgacggagcgcgttaaacgcctctgcgccaaggcgcgccggccggtg
cgccaggatcttctcgacgcgctcggcatgggcgatcgcgacatcaccaccggtgccatc
tgtgtctatcaccgtttcgtgtcgacggcggtcgacgcgctcgaggggtccggaattccg
gtggctgcggtttccaccggcttcccggcaggtctcattcggcatgacgtcaagctgaag
gaaatcgaggcttccgtcgccgacggcgccagggaaatcgacatcgtcattacgcgcgag
catgtgctgaccggcaactggcaggcgctctatgacgagatgcgcgatttccgcgatgcc
tgcggcgatgcgcatgtgaaggcgatcctcgcgaccggcgatctcaagaccttgcgcaat
gtcgcccgcgcctcgctcgtctgcatgatggccggcgccgacttcatcaagacctcgacc
ggcaaggagggcgtcaacgcgacgctgctcgtcaccctcgtcatgctcaggatgatccga
gcctaccaggagcggacaggcatcaaggtcggctacaagcccgccggcggtatttcgggg
gcaaaagacgtgctgaactaccagttcctcatgaaggaagagctcggccgcgaatggctc
gagccggatctcttccgcatcggggcgtcgagcctgttggcagacatcgaacgccagctc
gaacatcacgtcagcggcgcctactcggccctcaacagacacccgataggataa
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