Sinorhizobium fredii USDA 257: USDA257_c17560
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Entry
USDA257_c17560 CDS
T02188
Symbol
gabD4
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00250
Alanine, aspartate and glutamate metabolism
sfd00310
Lysine degradation
sfd00350
Tyrosine metabolism
sfd00650
Butanoate metabolism
sfd00760
Nicotinate and nicotinamide metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
USDA257_c17560 (gabD4)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
USDA257_c17560 (gabD4)
00310 Lysine degradation
USDA257_c17560 (gabD4)
00350 Tyrosine metabolism
USDA257_c17560 (gabD4)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
USDA257_c17560 (gabD4)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
USDA257_c17560 (gabD4)
1.2.1.20 glutarate-semialdehyde dehydrogenase
USDA257_c17560 (gabD4)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
USDA257_c17560 (gabD4)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFL50344
UniProt:
I3X388
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Position
1852691..1854169
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AA seq
492 aa
AA seq
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MAISEKLLSKLKDPSLVSDKALIAGEWVATSDSGKTFEVTNPADGDVIATLPDMNRAETA
RAIEVAYKAQKAWAKKTGKERAAVLRKLYDLMVANADDLAAILTMEMGKPLAEAKGEILY
GAAYLEWFGEEAKRVYGDTIPGHQPDKRIIVIKQPVGVVAAITPWNFPNAMLARKFAPAV
AAGCAMVSKPAAETPLSALSLGLLAERAGLPAGIFNVITSEDSPSVGKEFTENDKVRKLT
FTGSTGVGKILMRQGAEQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVSKYRNNGQTCV
CANRLYVQTGVYYTFAKKLVERVAAMKVGDGFEPGVNAGPLITEKAVEKVEEHIADALEK
GAKVAVGGKPDARGGLFFQPTILTGVTTQMKIAREETFGPVAPLFKFETEEQVIEMANNT
DFGLASYFYSRDVSKIFRVAEELEYGMVGINTGLISTEVAPFGGIKQSGQGREGSKYGIE
DYIEIKYLCLSV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctatttcggaaaaactcctctccaagctcaaagacccatcgctggtcagcgacaag
gcccttatcgccggcgaatgggtggccacgagcgacagcggcaagaccttcgaggtcacc
aacccggcagatggcgatgtgatcgccacgcttcccgacatgaaccgcgccgaaacggcg
cgcgcgatcgaagtcgcctacaaggcgcagaaggcctgggccaagaagaccggcaaggag
cgtgcggccgtgctccgcaagctctatgacctgatggtggcgaatgccgacgatctcgcc
gcaatcctgactatggaaatgggcaagccgcttgcggaggccaagggtgaaatcctctat
ggcgccgcctatctcgaatggttcggcgaagaggccaagcgcgtctatggcgacacgatt
cccggccaccagccggacaagcggatcatcgtcatcaagcagccggtcggcgtcgttgct
gccatcacgccgtggaactttccgaacgcgatgctcgcgcgcaaattcgcgccggccgtc
gccgcgggctgcgccatggtgtcgaagccggccgctgagacgccgctttcggccctgtcg
ctgggtttgctcgctgagcgcgccggccttccggccgggatttttaatgtcatcacctcg
gaggattcaccgtcggtcggcaaggaattcaccgagaacgacaaggtccgcaagttgact
ttcaccggctcgaccggtgtcggcaagatcctgatgcgccaaggtgccgagcagatcatg
aagctcggcctcgaactcggcggcaatgcgcccttcatcgtgttcgacgatgcggatctc
gatgctgcggtcgaaggcgccatggtctcgaaatatcggaacaacgggcagacctgcgtc
tgcgccaaccgcctctacgtccagaccggcgtctattataccttcgccaaaaagctggtc
gagagagtcgcggcgatgaaggtgggcgacggtttcgaacctggcgtgaatgccggcccg
ctgatcaccgagaaagctgtcgaaaaggtcgaggaacatatcgccgacgcgctcgaaaag
ggcgccaaggtggctgtcggcggcaaaccggacgcccgtggcggcctcttcttccagccg
accatactcaccggggtgaccacgcagatgaagattgcgcgcgaggagacctttggtccg
gtcgcgccgctcttcaagttcgagaccgaggagcaggtgatcgaaatggccaacaacacc
gacttcggcctcgcctcctatttctactcgagggatgtgtcgaagatcttccgcgtagcg
gaagaactcgaatatggcatggtcggtatcaataccggcctgatctccacggaagtggcg
ccgttcggcggcatcaagcagtccggccagggccgcgaaggctcgaaatacggcatagag
gattatatcgagatcaagtatctctgcttgagtgtttga
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