Sinorhizobium fredii USDA 257: USDA257_c22870
Help
Entry
USDA257_c22870 CDS
T02188
Symbol
lcfB4
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00280
Valine, leucine and isoleucine degradation
sfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
USDA257_c22870 (lcfB4)
Enzymes [BR:
sfd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
USDA257_c22870 (lcfB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
AFL50867
UniProt:
I3X4R1
LinkDB
All DBs
Position
complement(2397516..2399030)
Genome browser
AA seq
504 aa
AA seq
DB search
MSNHLFDAMRAAASGDAPFIRLNGGRTWTYQDARDLSSRIAGAIDTLGIRPGDRVAVQVD
KSPEALILYLACLRSGAVYLPLNTAYTLAELDYFIGDAEPRLVVVSSAARESVRTIAEPH
GAIVETLDADGKGSLLDLARDEPADFVDASRTADDLAAILYTSGTTGRSKGAMLTHGNLL
SNAMTLRDCWRVTAGDRLIHALPLFHTHGLFVATNVTLLAGASMFLLPKFDPEEVLSLMP
QATLLMGVPTFYVRLLQSPRLDRLAVANMRLFVSGSAPLLAETHVEFRKRTGHAILERYG
MTETNMNTSNPYDGERIAGTVGFPLPGVTVRVTDPATGAALPPEETGMIEIKGPNVFKGY
WRMPEKTAAEFTADGFFISGDLGKIDRDGYVHISGRSKDLVISGGYNIYPKEVEGEIDQL
EGVAESAVIGVPHPDFGEGVTAIVVRKPEAALDESAILGALKDRLARYKQPKRILFADDL
PRNTMGKVQKNVLRQQYADLYART
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaccatcttttcgacgccatgcgggcggccgcttccggcgatgcgccgttcatc
cggctcaatggcggccggacctggacctatcaggacgcgcgcgacctatcgagccgcatc
gccggcgccatcgatacgctcggcatccgcccgggcgaccgggtcgcagtacaggtcgac
aagagccccgaagcgctgatcctctatctcgcctgcctgcgcagcggcgcggtctatctg
ccgctgaacaccgcctatacgctcgccgaactcgactatttcatcggcgacgccgagccg
cgcctggtcgtcgtttcctcggcggcccgggagagtgtccgaacaatcgcagagcctcac
ggcgccatcgtcgaaacgctcgacgccgacggcaagggctcattgctcgatctcgcccgc
gacgaaccggccgacttcgtcgatgcctcgcgcaccgccgatgacctggcagcgatcctc
tatacgtcgggaacgaccggccggtccaagggcgccatgctcactcacggcaacctgctc
tcgaatgccatgaccttgcgcgactgctggcgcgtgaccgccggcgatcggctgatccat
gccctgccgctctttcatacccatgggctgtttgtcgccacgaatgtaacgctgcttgcc
ggcgcctcgatgttcctgcttccgaagttcgatccggaagaggtcttgtcgctgatgccg
caggcgacgctcctgatgggcgttccgaccttctacgtgcgcctcctgcagagcccgcgc
ctcgaccggctggcggtcgcgaacatgcgcctcttcgtttccggttccgcgccgctgctg
gccgaaacacatgtcgagttcaggaagcgtaccggtcacgcgatcctcgagcgctacggc
atgaccgagaccaacatgaacacctcgaacccctacgacggagaaaggatcgccggaacg
gtcggcttcccgctgcccggcgtgacggtgcgcgtcaccgatccggccaccggcgctgcc
ctgccgccggaggagaccggcatgatcgagatcaaggggccgaacgtcttcaagggctac
tggcggatgccggaaaagaccgccgcggaattcaccgccgatgggttcttcatcagtggc
gatctcggcaagatcgacagggatggctatgtccatatttcaggccgcagcaaggacctg
gtgatttccggcggatacaacatctatcccaaggaggttgagggcgagatcgaccagctc
gagggtgtcgccgaaagcgccgtgatcggcgtcccgcatcccgatttcggggagggcgtc
accgccatcgtcgtacgcaagccggaggcggcgctcgacgaaagcgccatcctcggcgcg
ctcaaggaccggctggcgcgctacaagcaacccaaacgcatcctctttgcagacgacttg
ccgcgcaacacgatgggcaaggtccagaagaacgtgctgcggcagcaatacgccgaccta
tacgccaggacgtga
DBGET
integrated database retrieval system
