Sinorhizobium fredii USDA 257: USDA257_c38370
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Entry
USDA257_c38370 CDS
T02188
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00130
Ubiquinone and other terpenoid-quinone biosynthesis
sfd01100
Metabolic pathways
sfd01110
Biosynthesis of secondary metabolites
sfd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
USDA257_c38370 (ubiD)
Enzymes [BR:
sfd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
USDA257_c38370 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AFL52382
UniProt:
I3X926
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Position
4000863..4002314
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AA seq
483 aa
AA seq
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MLERRGRLRRISRPVSLVHEVTEIHRRVLHAGGPALLFEKPVDASGRVCDIPLLANLFGT
QERIEWGFGLPAGGLPVLAEMLAELREPRSPQSLSDAWGKLPLLKAALAMRPRSVARPPV
QESVWRGAEADLSRLPIQWCWPGEPAPLVTWPLVITRAPDDPSDINVGIYRMQVLGPNRL
ILRWLAHRGGARHHRMWQQRGEDMPVAVAIGADPATILAAVMPLPEGMSELAFAGLLKAE
RPQVAPAITVPLTVPATAEIVLEGAVSPDETAEEGPYGDHTGYYNSVERFPVMTLSAITM
RRKPYYLSTFTGRPPDEPSKLGEAMMELFLPLVKRQFPEIIDLYLPPEACSYRAMVVSID
KRYPGQAKRIMMGLWSMLPQFSYTKLIIAVDPDIDVRNWDDVIWALSTRFDASRDVTILN
DTPIDYLDFASPKPGLGGKLGLDATRKLEPETTREWGRVLAMPAEVIGKVDQLWAELGLG
ATP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcggcgcggccgcttgcgccgcatctcgcgtcccgtttcgctcgtgcatgag
gttaccgagatccaccggcgcgtcctccacgcgggcgggccagcgctgctgttcgagaag
ccggtcgacgcctccggccgcgtatgcgacattccgctgctcgccaatctcttcggcacg
caagagaggatagagtggggtttcgggcttcccgctggcggtcttccggtcctggcggaa
atgctggcggagctgcgcgaaccgagatcgccgcaatcgctgtcggatgcctggggcaag
ctgccgctactgaaggcagcactcgcgatgcggccgcgaagcgtcgcgcggccgccggtg
caggagtcggtctggcggggcgcagaggccgacctttcgaggctgccgatccaatggtgc
tggccgggcgagccggctcctctcgtgacatggccgctcgtgatcacccgtgcgccggac
gatccgagcgatatcaatgttggcatctatcgcatgcaggtgctcgggccaaaccggctc
attctgcgctggctggcgcatcgcggcggcgctcggcaccatcggatgtggcagcagcgc
ggcgaagacatgccggtggcggtcgcgatcggcgccgatccggcaacgatcctcgccgcg
gtgatgccgttgccggaaggcatgagcgagcttgcctttgccggactgttgaaggcggag
cggccgcaggtcgcgccggcgatcaccgtgccgctgacggtcccggccacggccgagatc
gttctcgagggcgccgtttcgcctgacgagaccgccgaggaggggccctatggcgatcac
acggggtactacaactccgtcgaacgttttccggtgatgacgctctcggcgatcaccatg
cgacgcaagccctactatctctcaaccttcaccggccgcccgcccgacgagccgtcgaag
ctaggggaggcgatgatggagcttttcctgccgctcgtgaagcggcaattcccggagatc
atcgatctctacctgccgccggaggcctgctcgtatcgtgcgatggtcgtctctatcgac
aagcgttaccccggtcaggcgaaacgaatcatgatggggctttggtcgatgctgccgcag
ttcagctacaccaagctgatcatcgccgttgacccggacatcgacgtcaggaactgggac
gatgtcatctgggcgctatcgacccggttcgacgccagccgggacgtgaccatcctcaac
gacacgccaattgactacctggatttcgcgtctccaaagccagggcttggcggcaagctc
gggctcgacgcaacgcgaaaactcgagccggagacgacccgcgaatggggacgcgtgctt
gcgatgccggcggaagttatcgggaaggtcgatcaactttgggcggaacttggcctagga
gcaacgccatga
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