Sinorhizobium fredii USDA 257: USDA257_c54420
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Entry
USDA257_c54420 CDS
T02188
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00362
Benzoate degradation
sfd00364
Fluorobenzoate degradation
sfd00622
Xylene degradation
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
sfd01220
Degradation of aromatic compounds
Module
sfd_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
USDA257_c54420 (benD)
00364 Fluorobenzoate degradation
USDA257_c54420 (benD)
00622 Xylene degradation
USDA257_c54420 (benD)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
USDA257_c54420 (benD)
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Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AFL53964
UniProt:
I3XDK8
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Position
complement(5658508..5659296)
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AA seq
262 aa
AA seq
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MSTARFEGRFAGKVVVVTGAAQGIGRAVAIRAAEEGGKVLFVDRAEFVTEVAAEAPGAKT
AAFNADLETYEGAAAAMRFAEERFGGIDILINNVGGAIRMRPFAEFEPEQIDAEIRRSLM
PTLYCCHAVLPHLFARGGGVVVNVSSNATRGIHRMPYSAAKGGVNAITQSLAMELAGRNI
RVVATAPGGTEAPPRRIPRNAAGDTEAEKAWMADVVQQVKQSSFIKRYGTIEEQAAPILF
LASDEASYITGSVLPVAGGDFG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggcacgcttcgaaggccgttttgccggcaaggtggtggtcgtcacgggcgcc
gcgcaaggcatcggccgtgccgtggcgatccgcgccgcggaagagggcggcaaggtgctg
ttcgtggatcgcgccgaatttgtcaccgaggtcgctgccgaggccccgggcgccaaaacc
gcggccttcaatgccgacctcgaaacctatgaaggcgcggcggcagcgatgcggtttgcc
gaggagcggttcggcggcatcgacatcctgatcaataatgtcggcggggcgatccgcatg
cgtcccttcgcggaattcgagcctgagcagatcgacgccgaaatccgccgttcgctgatg
ccgacgctttattgctgccatgctgttctgccgcatctgttcgcgcgcggtggcggcgtc
gtcgtgaatgtctcgtcgaacgccacgcgcggcatccaccgcatgccctactcggccgct
aagggaggcgtgaacgcaatcacgcagtcgctggcgatggagctcgccggacgcaacatc
cgcgtggtcgccacggcgccgggcggcacggaggcgccgccgcgccggatcccgcgcaat
gccgccggtgacaccgaagcggagaaggcctggatggccgacgtcgtccagcaggtgaag
caatcgagcttcatcaagcgctacggcacgatcgaggaacaggccgcacctatcctgttc
ctggcatcggacgaggcgtcctacatcaccggcagcgttctgccggtcgcgggaggcgac
ttcggctga
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