Sinorhizobium fredii USDA 257: USDA257_c58730
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Entry
USDA257_c58730 CDS
T02188
Symbol
gabD8
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADP+] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfd
Sinorhizobium fredii USDA 257
Pathway
sfd00250
Alanine, aspartate and glutamate metabolism
sfd00310
Lysine degradation
sfd00350
Tyrosine metabolism
sfd00650
Butanoate metabolism
sfd00760
Nicotinate and nicotinamide metabolism
sfd01100
Metabolic pathways
sfd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
USDA257_c58730 (gabD8)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
USDA257_c58730 (gabD8)
00310 Lysine degradation
USDA257_c58730 (gabD8)
00350 Tyrosine metabolism
USDA257_c58730 (gabD8)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
USDA257_c58730 (gabD8)
Enzymes [BR:
sfd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
USDA257_c58730 (gabD8)
1.2.1.20 glutarate-semialdehyde dehydrogenase
USDA257_c58730 (gabD8)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
USDA257_c58730 (gabD8)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFL54384
UniProt:
I3XES8
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Position
6116448..6117902
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AA seq
484 aa
AA seq
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MNMKDPSLFRQAALVGDNWIEADPQNAIEVNNPATGEIIGLVPKLGAAETRAAIEIAARV
QKEWAARTAKERAAILRRWFELMIENKDDLGRILTIEQGKPLAEATGEIVYGASFIEWFA
EEGRRVYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPNAMITRKAGPAFAAGCAMVLK
PAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE
LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRLYVQDG
VYEAFSAKLAQAVAKLKTGNGMEEGVILGPLIDKPALEKVEEHVADALAKGARVIQGGQR
HALGGSFYEATVLADVTQAMAVAREETFGPVAPLFRFKDEADVIRQANDTEFGLASYFYA
KDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSKYGIEEFMEIKYVCL
GGIA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaggacccgtcgctgtttcgccaggccgcgctcgtcggcgacaactggatc
gaagcggacccgcagaatgcgatcgaggtgaacaacccggcgaccggcgagatcatcggt
cttgtgccgaagctcggtgccgccgagaccagggccgcgatcgagatcgccgcgcgggtg
cagaaggaatgggcggcgcgaaccgctaaggagcgcgcggcaatcctgcgccgctggttc
gagctgatgatcgagaacaaggacgatctaggccggatattgactatcgagcagggcaag
ccgcttgccgaagcgaccggcgagatcgtctatggcgcgagcttcatcgaatggttcgcc
gaagaggggcggcgcgtctatggcgacctcgtgcccggccaccagaaggacaagcgcatc
ctggtgatgaagcagccgatcggcgtggtcgctgccatcacaccctggaacttcccgaat
gcgatgatcacccgcaaggccggccccgcctttgccgccggctgcgccatggtgctgaaa
ccggccgcgcagacgccgttctcggcgatcgccatcgccgtgctcgccgagcgggccggc
atgccgaagggcctgttcagcgtcataaccggctcggcccgcgagatcggcgccgagatg
acctccaacccgaccgtgcgcaagctgaccttcaccggctcgaccgaggtcggcgccgag
ctctaccgccagagcgccgcgacgatcaagaagctcggcctcgaactcggcggcaacgcg
cctttcatcgtcttcgacgacgcggatctcgatgctgcggtcgagggcgccctgatcgcc
aagttccgcaacaacggtcagacctgcgtctgcgccaaccgcctctatgtccaagacggc
gtctacgaagccttctcggcgaagctggctcaagcggtcgccaagctcaagaccggcaac
gggatggaagagggcgtcattctcgggccgctgatcgacaagccggcgcttgagaaggtc
gaggagcatgtcgccgacgcgctcgccaagggcgcccgcgtcatccagggcggccagcgc
cacgcgctcggcggcagcttctatgaggcgacggtgctggcggacgtcacccaggcgatg
gcggtggcgcgcgaggaaaccttcggtccggtggcgccgctcttccgcttcaaggacgag
gcggacgtcatccgccaggcgaacgacaccgaattcggcctggcctcctatttctatgcc
aaggatctggcgcgcgtcttccgcgtcgcggaggcgctggagtacggcatggtcggcgtc
aataccggtctgatctcgacggcggaagcgcccttcggtggcgtcaagctctccggcctc
ggccgcgagggctcgaaatacggcatcgaggagttcatggaaatcaaatatgtctgcctc
ggcggtatcgcctga
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