Shigella flexneri 2002017 (serotype Fxv): SFxv_1600
Help
Entry
SFxv_1600 CDS
T01883
Symbol
yoaD
Name
(GenBank) putative FOG: EAL domain protein
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sfe
Shigella flexneri 2002017 (serotype Fxv)
Brite
Enzymes [BR:
sfe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SFxv_1600 (yoaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
MSC
Motif
Other DBs
NCBI-ProteinID:
ADA73816
UniProt:
D2AEK9
LinkDB
All DBs
Position
complement(1510994..1512622)
Genome browser
AA seq
542 aa
AA seq
DB search
MSPYAYRVARMQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFA
NHAVEELDKVLLPLQAGSKVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCS
SIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVIEMINID
LLTAMLLEPQLPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQSFPFTINVNG
PGATALAWHYLPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLL
NARSQQCIGVEILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTHYVMAETIRQHHVFPMS
SQFHVGINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRK
NVKLAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIE
LVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMS
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgccatacgcttacagggtggcccgcatgcaaaaagcacaacggatcattaaaacc
tatcgccgtaatcgaatgattgtttgtacgatttgcgcactcgttacgctcgcttcgacc
ctgagcgtgcgatttatttcacagcgtaacttaaatcaacaacgggtagtacaattcgcc
aatcacgctgtagaggaattagataaagtactgcttcccctacaggcaggtagcaaagtc
ttgcttccgctgattggtctgccctgctctgtcgcccatttgccattacgtaaacaggcg
gcaaaactccaaactgtgcgatccattggcctggtgcaagacggcacactttattgctcc
agcatttttggttatcgcaatgtgcccgtcgtggacattctggctgaacttcctgcaccg
caaccacttttacgcctgacgatcgaccgtgccctgattaaaggcagtccggttttgatt
caatggacgcctgcagcgggcagtagcaatgctggggtcatagagatgattaacatcgac
ttactgacggcaatgctccttgagccacaactgccgcaaatcagtagcgccagcctgacg
gtggacaaacggcatttgctctatggtaatgggctggtagattcccttccgcaacctgaa
gacaatgaaaactatcaggtttcttcgcaaagctttccttttaccattaacgtaaatggt
ccgggggctacggcgctggcatggcactatcttccaacacaattaccgctggcggtgctg
ctaagtttactggtgggctatatcgcctggctggcgaccgcttaccggatgagcttttcc
cgcgaaattaatctgggcctggcgcaacatgagttcgaattgttctgtcagcctttgctt
aatgcgcgcagccagcaatgtattggtgtagagattttgctgcgctggaataatccgcgt
cagggctggatttcaccggatgtgtttattcctatcgcggaagaacatcatttaattgtg
ccactgacccactatgtgatggcagaaaccattcgtcagcaccatgttttcccgatgagt
agtcagtttcatgttggcattaacgtcgcacccagccattttcgccgtggtgtgctgata
aaagatctcaatcagtactggtttagcgctcacccgattcagcaactgatcctcgaaatc
accgaacgcgatgccttactggatgttgattatcggattgcccgcgagctgcatcgtaaa
aacgtcaaactggcgattgatgacttcggcaccggcaacagctcgttttcctggcttgaa
acattacgtcctgacgtgctgaaaattgataagtcatttaccgcagctataggttctgac
gcggttaactcgacggtgaccgatatcatcatcgcgctggggcaaagactgaatattgaa
ctggtggcggagggcgtggaaacgcaagaacaggcgaagtatttgcgccgtcatggcgtg
catattttgcaagggtatttgtacgcacagccgatgccgctacgtgattttcccaaatgg
ctggcgggcagccaaccgccgcccgcccggcataatggacatatcacgcccattatgtcg
ttacgttaa
DBGET
integrated database retrieval system
