Sinorhizobium fredii HH103: SFHH103_00061
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Entry
SFHH103_00061 CDS
T01731
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh00300
Lysine biosynthesis
sfh01100
Metabolic pathways
sfh01120
Microbial metabolism in diverse environments
sfh01230
Biosynthesis of amino acids
Module
sfh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFHH103_00061 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfh01002
]
SFHH103_00061 (dapE)
Enzymes [BR:
sfh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SFHH103_00061 (dapE)
Peptidases and inhibitors [BR:
sfh01002
]
Metallo peptidases
Family M20
SFHH103_00061 (dapE)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CCE94565
UniProt:
G9A9X4
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All DBs
Position
complement(65000..66193)
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AA seq
397 aa
AA seq
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MFPTDPISNLAALIRCPSVTPDEGGALTALETMLAPLGFTVDRVVAKEAGTPDIENLYAR
LGTEGPHLMFAGHTDVVPVGDEAAWSHPPFSAAIAGGEMYGRGAVDMKGGIACFVAAVAR
HIEKHGRPKGSISFLITGDEEGPAINGTVKLLEWAAQKGERWDACLVGEPTNPESLGDMI
KIGRRGSLSGRIIVHGVQGHAAYPHLADNPVRGILQLAQALMDPAFDNGTEDFQPSNLEV
TTIDVGNPAVNVIPAKATAAFNIRFNDSWTAESLKAEIVARLDRAAKDETLRPGRQPVKY
DIVWNERPSHVFLTRNNALIDSLSGAIEAVTGRQPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTGIYETFVARWFGHAAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttccccaccgatccgatctccaatctcgccgccctcatccgttgcccatcggtcacc
ccggacgaaggcggggcgctcaccgctctggaaacgatgctggcgccgctcggcttcacg
gtcgatcgggtcgtggcgaaggaggcaggcacgccggatatcgagaacctctatgcccgg
ctcggcaccgaaggcccgcatctgatgttcgccggccacaccgatgtcgtgccggtcggc
gacgaagccgcctggtcccatccgccgttctccgccgcgatcgccggcggcgaaatgtac
gggcgtggcgccgtcgacatgaagggcggcattgcctgcttcgtcgcagccgtggcccga
cacatcgagaagcatggccgcccgaaaggctcgatctccttcctgatcaccggcgacgag
gaaggcccggcgatcaacgggacggtgaagcttctcgaatgggctgcccaaaaaggcgaa
cgctgggacgcctgcctcgtcggcgagccgaccaatccggagagcctcggcgacatgatc
aagatcggccggcgcggctcactgtccggccggatcatcgtgcacggcgtccagggccac
gccgcctatccgcaccttgccgacaatccggtgcgcggcattctgcagctcgcgcaagcg
ctgatggacccagccttcgacaatggcaccgaggatttccagccgtccaatctggaagtg
acgacgatcgacgtcggcaatcccgccgtcaacgtcattcccgcgaaggcgactgccgcc
ttcaacatccgcttcaacgatagctggacggccgaaagcctgaaggccgagatcgtcgcc
cgtctcgaccgcgccgcgaaggacgaaacgctccggcccggccggcagccggtcaaatac
gatatcgtctggaacgagcgcccgagccacgtcttcctgacgcgcaacaacgcgctgatc
gattcgctttccggcgcgatcgaggcggtgaccgggcgccagccgaagctctccaccacc
ggcggcacgtcggacgcccgcttcatcaaggactattgcccggtggtcgagttcggcctt
gtcggccagaccatgcacatggtcgacgaacgggtcgccgtcgccgatctcgagaccttg
accggaatctacgaaaccttcgttgcccgctggttcggccatgccgctgcttga
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