Sinorhizobium fredii HH103: SFHH103_03694
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Entry
SFHH103_03694 CDS
T01731
Symbol
polA
Name
(GenBank) K02335 DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfh
Sinorhizobium fredii HH103
Pathway
sfh03030
DNA replication
sfh03410
Base excision repair
sfh03420
Nucleotide excision repair
sfh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SFHH103_03694 (polA)
03410 Base excision repair
SFHH103_03694 (polA)
03420 Nucleotide excision repair
SFHH103_03694 (polA)
03440 Homologous recombination
SFHH103_03694 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfh03032
]
SFHH103_03694 (polA)
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_03694 (polA)
Enzymes [BR:
sfh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SFHH103_03694 (polA)
DNA replication proteins [BR:
sfh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SFHH103_03694 (polA)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SFHH103_03694 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFHH103_03694 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
PUA_4
IMS_HHH
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
CCE98185
UniProt:
G9A564
LinkDB
All DBs
Position
4019746..4022835
Genome browser
AA seq
1029 aa
AA seq
DB search
MRNVSVRVRTKPQWTFASPRAIHGRMKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPV
NAVAGFCNMLWKLLTDARDTSVGVTPTHFAVIFDYSSKTFRNALYDQYKANRTAPPEDLI
PQFGLIRHATRAFNLPCIEKEGYEADDLIATYARLAEEVGAGVTIVSSDKDLMQLVTPNV
TMYDSMKDKQITIPDVIEKWGVPPEKMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYG
DLDTLLSRAGEIKQQKRRESIVANAELARLSRELVTLKKDTPLDVPLEDLRLDSQDGPKL
IAFLKTMEFTTLTRRVAAATETDAEAVEPAHVPVEWGAAAHGPDLDVGEAAGPLPTPASS
SAAPPRGNAAKAAVSFLTGKGDADATGATPQGLAQARADYFAKAPFDHSAYVTIRDLATL
DRWIADAREAGVLGFDTETTSLDPMRADLCGVSLAIADYSNNPMGGTIRAAYVPLIHKSG
VGDLLGGGLVENQIAMREALSRLKVLLEDPSVLKVAQNLKYDYLVMKRHGITLQSFDDTM
LMSYVVDAGNGTHGMDSLSERWLGHTPIPYKDVAGTGKASVSFDFVDIDRATAYAAEDAD
VTLRLWHVLKPRLAAKGLTRVYERLEKPLIAVLAHMEERGITVDRQILSRLSGELAQGAA
ALEDEIYRLAGETFTIGSPKQLGDILFGKMGFPGGSKTKTGQWSTSASVLEDLAAVGHEL
PRKIVDWRQLTKLKSTYTDALPGFVHPETKRVHTGYALAATTTGRLSSSEPNLQNIPVRT
AEGRKIRTAFIATPGHKLVSADYSQIELRVLAHVADIPQLRQAFADGVDIHAMTASEMFG
VPVDGMPSEIRRRAKAINFGIIYGISAFGLANQLSIERSEAGDYIKRYFERFPGIRDYME
NTKAFAREHGYVETIFGRRAHYPDIRSSNPSMRAFNERASINAPIQGSAADIIRRAMVKM
EPALDEAKLAARMLLQVHDELIFEVEESEIERTLPVIVSVMENAAMPALDMRVPLKVDAR
AAQNWDEAH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacgtttccgtgagggttcggacgaaaccgcaatggacctttgcctccccccgc
gctatccatggccgcatgaaaaacggtgatcatctcttcctcgtcgacggctcgggtttc
atcttccgggcgttccatgccatcccgccgctcaaccgcaagtcggacgggcttccggtc
aacgcggtcgccggcttctgcaacatgctctggaagctgttgaccgatgcgcgcgacacc
tcggtcggcgtgacgccgacgcatttcgcggtgatcttcgactattcctcgaagaccttc
cgcaacgcgctctacgaccagtacaaggcgaaccgcaccgcgccgccggaagacctgatc
ccgcaattcgggctgattcgccacgccacccgcgccttcaacctgccctgcatcgagaag
gaaggctacgaggcggacgatctgattgcaacctatgcgcggcttgccgaggaggtgggc
gccggcgtcacgatcgtctcctccgacaaggacctcatgcaattggtcacgcccaatgtg
acgatgtacgacagcatgaaggacaagcagatcaccattcccgacgtgatcgagaaatgg
ggcgtgccgcccgagaagatgatcgatctccaggcgatgaccggcgattcgaccgacaac
gtcccgggcattccgggcatcggcccgaagaccgcggcgcagctcctcgaagaatatggc
gacctcgacacgctgctttcgcgggccggcgagatcaagcagcagaaacggcgcgagtcg
atcgtcgccaatgcggagctggcgcgcctgtcgcgcgaactcgttaccttgaagaaggac
acgccgctcgacgtgccgctcgaggatctgcggctcgattcgcaggatggcccgaagctc
atcgccttcctgaagacgatggaattcaccaccctgacgcgccgcgtcgcggcggcgaca
gaaaccgatgcggaggcggtggagccggcgcatgtgccggtcgaatggggtgccgccgcg
cacggacccgatctcgatgtgggcgaggcggccgggccgctgccgacgccggcatcgtcg
agcgccgcgccgccgcgcggcaacgccgccaaggcggcggtttcgttcctgacgggcaag
ggcgacgcggatgccaccggcgcgacgccgcaggggctggcgcaggcgcgcgccgattat
ttcgccaaggcgccgttcgatcattcggcctatgtgacgattcgcgaccttgcgaccctc
gaccgctggatcgccgatgcgcgcgaggcgggggtcctgggtttcgacacggagacgacg
tccctcgacccgatgcgggccgacctctgcggcgtctcgctggcgatcgccgattacagc
aacaatcctatgggcggcaccatccgcgccgcctatgtgccgctgattcacaagagcggc
gtcggtgacctgctcggtggcggtctcgtagaaaaccagatcgccatgcgcgaggcgctg
agccggctaaaggttctgttggaagacccgtccgtccttaaggtcgcccagaacctgaaa
tacgactatctcgtcatgaagcggcacggcatcaccctgcagagcttcgacgacacgatg
ctgatgtcctatgtggtcgatgccggcaacggcacgcacggcatggattcgctctcggag
cggtggctcggccacacgccgatcccctacaaggacgttgccggcaccggcaaggcgtcg
gtgagcttcgatttcgtcgacatcgacagggcgactgcctatgcggccgaggacgccgat
gtgacgctgcgcctctggcacgttctgaagccgcggcttgccgctaagggcctgacgcgc
gtctatgaacggctcgaaaagccgctgatcgccgtgctggcgcatatggaggagcgcggc
attaccgtcgaccggcagatcctgtcgcgcctttccggcgagctggcgcagggggccgca
gcactcgaggacgagatttaccggctggccggcgagactttcaccatcggctcgcccaag
cagctcggcgacattctgttcggcaagatgggctttcccggcggctcgaagacgaagacc
gggcaatggtcgacctccgcttcggtgctcgaggatcttgccgccgtcggccacgagctg
ccgcgcaagatcgtcgactggcgccagctcaccaagctcaagtccacctataccgacgcg
ctgccgggctttgtccatccggagacgaaacgcgtccacaccggctacgcgcttgccgcg
acgacgacggggcggctttcctcctcggagccaaacctgcagaacattccagtgaggacc
gccgagggtcgcaagatccgcaccgccttcatcgcgacgcctgggcacaagctggtctcg
gccgactacagccagatcgaactgcgcgtgctcgcccatgtcgccgacatcccgcagctt
cgccaggcctttgccgacggcgtcgacatccacgcaatgaccgcgtccgaaatgttcggc
gtgccggtcgacggcatgccgagcgagatccgccgccgcgccaaggcgatcaatttcggc
atcatctacggcatctccgccttcggcctggccaaccagctgtcgatcgagcgctcggaa
gccggcgactatatcaagcgctatttcgagcgcttcccgggcatccgcgactatatggag
aacaccaaggccttcgcccgcgagcatggctatgtcgagacgatcttcggccgccgcgcc
cattatccggatatccgctcctcgaacccgtcgatgcgcgccttcaacgagcgcgcctcg
atcaacgcgccgatccagggttcggccgccgacatcatccgccgcgccatggtcaagatg
gagccggcgctcgatgaggcgaagcttgccgcccgcatgctgctgcaggtgcacgacgag
ctgatcttcgaggtcgaggagagcgagatcgagcgcaccctcccggtgatcgtttcggtg
atggagaatgcggcaatgccggcgctcgacatgcgcgtgcccttgaaggtggatgcccgc
gccgcgcagaactgggacgaggcgcattag
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