Serratia ficaria: SAMEA4384070_0192
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Entry
SAMEA4384070_0192 CDS
T06444
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfj03009
]
SAMEA4384070_0192 (rsmD)
Enzymes [BR:
sfj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SAMEA4384070_0192 (rsmD)
Ribosome biogenesis [BR:
sfj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMEA4384070_0192 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Motif
Other DBs
NCBI-ProteinID:
SNV81370
UniProt:
A0A240ADM7
LinkDB
All DBs
Position
1:complement(212993..213613)
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AA seq
206 aa
AA seq
DB search
MTRLSPRAAAKKPAQAAAGQIRIIGGQWRGRKLPVPSSPGLRPTTDRVRETLFNWLAPVI
QGARCLDCFAGSGALGLEALSRYAGSATLLEYERPVAQQLEKNLALLQGKGTVVNTNTLS
WLAGGGQPFDVVFLDPPFRKGLLAETVTLLEQRGWLADEAWIYVEAEAESAAADVPANWQ
LHREKVAGQVAYRLYIRSQEKTNHAD
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacaagactatcgccacgggcggcggcaaaaaaaccggctcaggccgcagccgggcag
atccgcatcatcggcggccaatggcgtgggcgcaagctgccggtgccgagcagcccgggg
ctgcgcccgaccaccgatcgggtgcgtgaaaccctgttcaactggctggcgccggtgatc
cagggggcgcgttgcctggactgtttcgccggcagcggcgcgctggggctggaggcgctg
tcgcgctatgccggcagcgccacgctgctggaatatgaacggccggtggcgcaacagctg
gaaaaaaacctggcgctgctgcagggcaaaggaacggtggtcaataccaatacgctaagc
tggctggcgggcggcggccagccgtttgacgtggtgtttctcgatccgccgttccgcaaa
gggctgctggcggaaaccgtcacgctgctggagcagcggggctggctggccgacgaggcc
tggatctacgtggaggccgaagcggaaagcgccgcggccgatgtgccggccaactggcag
ttgcaccgtgagaaagtcgccggtcaggtggcttaccgtctttatattcgttcgcaagag
aaaaccaatcatgctgattaa
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