KEGG   Serratia ficaria: SAMEA4384070_1096
Entry
SAMEA4384070_1096 CDS       T06444                                 
Symbol
ribD_2
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sfj  Serratia ficaria
Pathway
sfj00740  Riboflavin metabolism
sfj01100  Metabolic pathways
sfj01110  Biosynthesis of secondary metabolites
sfj01240  Biosynthesis of cofactors
sfj02024  Quorum sensing
Module
sfj_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sfj00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SAMEA4384070_1096 (ribD_2)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMEA4384070_1096 (ribD_2)
Enzymes [BR:sfj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SAMEA4384070_1096 (ribD_2)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SAMEA4384070_1096 (ribD_2)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: SNV94407
UniProt: A0A240BEW2
LinkDB
Position
1:1169175..1170284
AA seq 369 aa
MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMA
GEKARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGLYKLQQAG
LEVRHGLMLAEAEAVNLGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSAQARQD
VQRLRAQSAAILSTSATVLADDPSLTVRWDELDAETQRIYPREHLRQPLRIILDSQNRVT
PQHRVVQQAGATWLARLQPDQQAWPPEVEQLTFPAHGGGVDLVVMMMQLAKRQVNSIWVE
AGARLAGALLQAGLVDELILYIAPKLLGDNGRGLCHLPGLERLADAPEFVFSEVRQVGPD
LRLILRAKH
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcacaacgacgaattttacatggcgcgcgcctttgaactggcgcggctggggcgtttt
accaccgcgcccaacccgaacgtcggctgcgttatcgtgcgcgatggcgaaatcgtcggt
gaaggttaccatctgcgcgccggcgaaccgcacgcggaagtgcacgcgctgcgcatggcg
ggcgagaaggcgcgcggcgcgaccgcctatgtgacgctcgaaccctgcagccaccatggc
cgcacgccgccctgcgccgatgcgctggtggccgccggggtcagccgggtggtcgcggcg
atgcaggatcccaatccgcaggtggcggggcgcgggctgtacaagctgcagcaggccggc
ctggaggtacgccatgggctgatgctggccgaagccgaggcggtgaacctggggttcctg
aagcgcatgcgcaccggtttcccctatctgcagctgaagctgggcgcttcgctggacggc
cgtacggcgatggcttccggcgagagccagtggatcacctctgcgcaggcgcggcaagac
gtacagcgtctgcgcgcgcaaagcgccgccattctcagcaccagcgccaccgtgttggcg
gacgatccgtcgctgacggtgcgctgggacgagctggatgccgaaacgcagcgcatttat
ccgcgagagcacctgcgccagccgctgcgcattattctcgacagccaaaaccgggtcacc
ccgcagcaccgggtggtgcaacaggcgggcgccacctggctggcgcgcctgcagccggac
cagcaggcgtggccgccggaggtggagcagctgactttcccggcgcacggcggcggcgtc
gatctggtggtgatgatgatgcagctggcgaagcgccaggtgaattccatctgggtcgag
gcgggtgctcggttagccggcgcgctgctgcaggccgggttggtggatgagctcattttg
tacatcgcgccaaaactgttgggcgataatggccggggcctgtgccatctgccggggctg
gagcggctggccgacgcccctgagtttgtcttcagcgaagtgcggcaggttggccccgat
ctgcgcctgatcctgcgggccaaacactga

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