Serratia ficaria: SAMEA4384070_1105
Help
Entry
SAMEA4384070_1105 CDS
T06444
Symbol
thiI
Name
(GenBank) tRNA sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sfj
Serratia ficaria
Pathway
sfj00730
Thiamine metabolism
sfj01100
Metabolic pathways
sfj01240
Biosynthesis of cofactors
sfj04122
Sulfur relay system
Module
sfj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SAMEA4384070_1105 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SAMEA4384070_1105 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfj03016
]
SAMEA4384070_1105 (thiI)
Enzymes [BR:
sfj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SAMEA4384070_1105 (thiI)
Transfer RNA biogenesis [BR:
sfj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SAMEA4384070_1105 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
SNV94480
UniProt:
A0A240BFX6
LinkDB
All DBs
Position
1:1177378..1178826
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILSTNIRNVLKQYDETLAVVRHWDHIEVRAKDENQR
PVIADALTRIPGIHHILEVEDRAYRDIHHIFEQTLEAYREQLEGKTFCVRVKRRGKQDFN
SQDVERYVGGGLNQHIDSARVNLSRPQVTVNLEIEDDKLMLVKARREGIGGYPVGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHFCFFNLGGAAHEIGVKQVAHYLWNRFASSHKVRFV
AIDFEPVVGEILEKVDDGQMGVVLKRMMVRAASRVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKVAREIGTEDFAKTMPEYCGVISKSPTVKAIKARI
EEEESHFDFAILDRVVSEAKNVDIRTIAEQAQEQVAEVETVAAFGADEVILDIRSNDEQE
DKPLQLEQVEVKPLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLLEQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcgcttg
cgctttatcaagatcctctcgaccaatattcgcaacgtcctgaagcagtatgatgaaacg
ctggcggtagtccgtcactgggatcatatcgaagttcgcgccaaagatgaaaatcaacgg
ccggtgattgccgacgcgctgacgcgcattcccggcatccaccatatcctggaagtggaa
gaccgcgcctaccgcgatattcaccacatcttcgagcagacgctggaagcttaccgcgaa
cagctggaagggaaaaccttctgcgtgcgggttaaacgccgcggcaagcaggatttcaat
tcgcaggacgtagaacgctacgttggcggcgggctgaatcagcacatcgacagcgcgcgg
gtgaatctttcccgcccgcaggtgacggtgaacctggagatcgaagacgacaagctgatg
ctggtcaaggcgcgccgcgagggcatcggcggctacccggtcggcacccaggaagacgtg
ctgtcgctgatctccggcggctttgactcgggcgtgtccagctatatgctgatgcgccgc
ggttgccgcgtgcatttctgcttcttcaacctgggcggcgcggcgcatgaaatcggcgta
aaacaggtggctcattacctgtggaaccgcttcgccagctcgcacaaggtgcgtttcgtc
gccatcgacttcgaaccagtggtgggcgagatcctggaaaaggtcgacgacggccagatg
ggcgtggtgctcaaacgcatgatggtgcgcgccgcttcccgggtggccgagcgctatggc
gtacaggcgctggtgaccggcgaagcgctggggcaggtatccagccagacgctgaccaac
ctgcgcctgatcgacaacgcttccgatacgctgatcctgcgtccgctgatttctcacgac
aaagagcacatcattaaggtggcgcgcgagatcggcaccgaagacttcgccaagaccatg
cccgaatactgcggcgtgatttcgaaaagcccgacggtgaaggccatcaaagccagaatc
gaagaagaagaaagccatttcgatttcgccattctcgatcgggtggtgagcgaagcgaag
aacgtcgacatccgcaccatcgccgagcaggcgcaggagcaggtggccgaagtggaaacc
gtcgcggccttcggcgccgatgaggtgatcctcgacattcgttcgaacgacgaacaggaa
gacaaaccgctgcagctggagcaggtggaggtcaaaccgctgccgttctataagctcggc
acccagtttggcgacctggatcaaagcaagacctacctgctgtactgcgagcgcggcgtg
atgagccgcctgcaggcgctgtacctgctggagcagggcttcaccaacgtcaaagtctat
cgcccttaa
DBGET
integrated database retrieval system
