Serratia ficaria: SAMEA4384070_4668
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Entry
SAMEA4384070_4668 CDS
T06444
Symbol
gmr
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
sfj
Serratia ficaria
Pathway
sfj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4384070_4668 (gmr)
Enzymes [BR:
sfj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SAMEA4384070_4668 (gmr)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
PAS_3
Motif
Other DBs
NCBI-ProteinID:
SNW06114
UniProt:
A0A240CDS4
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All DBs
Position
1:4997987..4999981
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AA seq
664 aa
AA seq
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MFADQGPMLLNAHFGTNSPYWRLAFDSNALELSAVKGKAHLAVALSAMQAAKIRRLSGVT
ASLDLSITLAGEQIHLHLVGRRVNKLEWAGTASAFSDTQSVARDLVHGLSFAEQVVSEAN
SVIVIVDQHGRIQRFNRLSEEYTGLHEHDVIGKNVFQLFMSPEEAAASRRNIAGFFRNGS
SYEVERWIKTVKGERLFLFRNKFVHSGSGKNEVFLICSGTDITEERRAQERLRVLANTDI
ITGLPNRNAIQDKITRAIANRQDDNVGLVYLDLDNFKKVNDAYGHMFGDRLLVEVSLAIL
GCLSPDQVLARLGGDEFLVLAQQANREMLQTLAQRIIDRLKTPFRIGLIEVYTGCSIGIA
LCPEHGNDLDSLIRSADTAMYVAKEQGKRTYTVFSPEMNRRVAEYMWLDTNLRKGLEQNQ
LVVYYQPKIDARSGEVHSVEALVRWDSPERGLIPPLQFISYAEESGLIGPLGQWVLQTAA
GQAAQWQRQGLNLRVAVNLSARQLADDGIVDALIGMLHHHRMTPCLLDFELTESSLIEDE
ARARALITRLRELGAQVHLDDFGTGYSSLAQLARIPLDAIKLDKSFVRGVDANPVSQSLV
RAIVAAAEALAFRVIAEGVETESENRFLDEVGVDEKQGFLFARPMLPAQLEHWLRSYRPH
TPSA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaccaaggccctatgcttcttaacgcgcatttcggcaccaacagcccctac
tggcggttggcgtttgacagcaacgccctggaactgtccgccgtcaaaggaaaagcccac
ctggcggtggcgctcagcgccatgcaagcggcaaaaatccgccggctgagcggcgttacc
gccagcctcgacctcagcattacgctggccggcgaacagatacacctgcatctggtggga
agacgcgtcaacaagctggaatgggccggcaccgcctccgccttcagcgatacccagtcg
gtagcgcgtgacctggtgcacggcctgtccttcgccgaacaggtggtctcggaagccaac
tctgtgatcgtgattgtcgatcagcacggccgcattcaacgcttcaatcgcctgagcgag
gaatataccgggctgcatgagcatgacgtgatcggcaaaaacgtctttcagctgttcatg
agccccgaagaggccgccgcctccaggcgcaacatcgccggtttctttcgcaacggctcc
tcctacgaggtggagcgctggataaaaacggtcaaaggcgagcggctgttcctgtttcgc
aacaagttcgtccacagcggcagcggcaaaaacgaggtgttcctgatttgctccggcacc
gacatcaccgaagagcggcgcgcgcaggagcggctgcgggtgctggccaataccgatatc
attaccggcctgcccaaccgcaacgccatccaggataaaatcacccgggccatcgccaac
cgccaggacgacaacgtcgggctggtgtatctcgatctcgacaatttcaagaaggtgaac
gacgcctacggccacatgttcggcgaccgtctgctggtcgaggtctcgctggcgatcctc
ggctgcctgagcccggaccaggtgctggcccggctgggcggcgacgaattcctggtgctg
gcgcagcaggccaaccgcgaaatgctgcaaaccctggcgcagcgcatcatcgatcggctg
aaaacccccttccgcatcggcctgatcgaagtctataccggctgctcgatcggcatcgcg
ctgtgcccggagcacggcaacgatctcgacagcctgatccgcagcgccgataccgccatg
tacgtggccaaagagcagggcaagcgcacctataccgtgttttcgccggaaatgaacagg
cgcgtcgccgaatacatgtggctggacaccaacctgcgcaaagggctggagcagaaccaa
ctggtggtttattaccagccgaagatcgacgcgcgcagcggcgaagtgcacagcgtggag
gccctggtgcgctgggattcgccggagcgcgggctgatcccgccgctgcagttcatctcg
tacgccgaggagtccgggctgatcggcccgctggggcaatgggtgctgcagaccgccgcc
gggcaagcggcgcagtggcagcggcaggggctgaacctgcgggtggcggtcaatctgtcc
gcccggcagttggccgacgacggcatcgtcgacgcgctgatcggcatgttgcatcaccat
cggatgacgccctgcctgctggacttcgagctgaccgaaagcagcctgattgaagacgaa
gcgcgcgcgcgggcgttgatcacccggctgcgtgagttgggcgctcaggtgcatcttgac
gattttggcaccggctattcatcgctggcccagctggcgcgcattcccctggacgccatc
aagctggataaaagctttgtgcgcggggtagacgccaacccggtgtcgcaatcgctggtt
cgcgccatcgttgcggcggcggaggcgctggcattcagagtgatcgccgaaggcgtggag
accgaaagcgaaaaccgcttcctcgacgaggtcggcgtggatgaaaaacagggcttcctg
tttgcgcggccaatgctcccggcgcagctggaacattggctgcggtcatatcgcccgcac
accccctcagcgtga
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