Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02633
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Entry
SPHFLASMR4Y_02633 CDS
T04949
Symbol
lysK
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPHFLASMR4Y_02633 (lysK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfla01007
]
SPHFLASMR4Y_02633 (lysK)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_02633 (lysK)
Enzymes [BR:
sfla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPHFLASMR4Y_02633 (lysK)
Amino acid related enzymes [BR:
sfla01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SPHFLASMR4Y_02633 (lysK)
Transfer RNA biogenesis [BR:
sfla03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPHFLASMR4Y_02633 (lysK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Anticodon_2
tRNA-synt_1b
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ASK89371
UniProt:
A0A220W982
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All DBs
Position
2702571..2704151
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AA seq
526 aa
AA seq
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MTDYREAAENSKAWPFEEARKLLKRYRGERGAPAPKPGGEPMLFETGYGPSGLPHIGTFN
EVLRTTMVRHAYETLTGNPTRLIAFSDDMDGFRKVPTNVPNQDMLAEHLHKPLTQVPDPF
GKFESFAAHNNAMLRDFLDQFGFDYEFMSSTEQYRSGAFDETLKLVLARNQQILDIMLPT
LGKERQATYSPILPISPKTGHVLQVPVEVVDAEAGIVRFEDDGEMIEHVALSGGAKLQWK
VDWAMRWTALGVDYEMYGKDLTDSGIQSGKIAKILGARKPEGLIYEMFLDEKGEKISKSK
GNGLSLEEWLRYGSENSLAFYIFREPKSAKQLHMGVIPKAVDEYFQFRANWHEQDAVKRL
GNAVHHVHNGDVPTDTIPVTFGLLLNLVGVMGDADREQIWGYLRQYAPDATPERYPDLDE
LIGNAMAYHKDFIAPTLKRRKPEGVEVAALQRLDSELAALPDEAPAEDIQNIVYAIGKEG
GFDNLRDWFKALYETLLGSSQGPRMGSFIALYGIDNTRKLIAEALA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattatcgtgaagcagcagagaattccaaagcgtggccgttcgaggaagcccgc
aagctgctcaaacgctatcgcggcgagcgcggcgcaccggcaccaaaaccgggtggcgaa
ccaatgctgttcgagaccggctatggtccgtcgggcctgccgcatatcggcacgttcaac
gaagtgttgcgcacgacgatggtgcgtcacgcctatgaaacgctgaccggcaatccgaca
agactgatcgcgttcagcgacgacatggacggatttcgcaaggtgccgaccaatgttccc
aatcaggatatgctggccgagcatctgcacaagccactcacgcaggttcccgacccgttc
gggaaattcgagagttttgcggcgcataataatgcgatgctgcgcgattttctcgaccag
ttcggttttgactatgagttcatgtcctcaaccgagcaatatcgcagcggcgcctttgac
gagacgctgaagctggttttggcccgcaaccagcagatactcgacatcatgctgccgact
ctgggcaaggagcggcaggcgacctattcgccgatactgccgatcagcccgaaaaccggt
catgtgctgcaggtgccggtggaggttgtcgacgcggaagcggggatcgtccgtttcgaa
gacgatggcgagatgatcgagcatgttgcgctgagcggcggtgccaagctgcaatggaag
gtggactgggcgatgcgctggaccgcgcttggtgtcgactatgaaatgtatggcaaggac
ctgaccgacagcggcatccagtccgggaagatcgccaagatattgggcgcacgcaaaccc
gaggggctgatctacgagatgttcctcgacgagaagggcgagaagatatccaagtccaag
ggcaatggcctcagcctcgaggaatggctgcgctatggctccgagaacagccttgcattc
tatatcttccgcgagccgaagtccgcgaagcaattgcatatgggtgtgatccccaaggcg
gtggacgaatatttccagttccgcgccaactggcacgagcaggacgccgtcaagcggctc
ggcaatgcagtgcatcatgtccacaatggcgatgtgccgacggatacgatcccggtcacc
ttcggcctgctgctcaatcttgtcggcgtgatgggcgatgcggaccgcgagcagatctgg
ggctatctgcggcaatatgcgccggacgccacgcccgaacgctatcctgatctcgacgag
ctgattggcaatgccatggcctatcacaaggatttcatcgctccgaccctgaagcgtcgc
aagcccgaaggggtggaagtggcggcgctgcagcggctcgatagcgagctggccgcactg
ccggacgaagcacctgccgaggatatccagaatatcgtctatgccattggcaaggaaggc
ggcttcgacaatctgcgcgactggttcaaggctttgtacgagacgttgctcggctcgtcg
cagggaccgcgcatgggtagtttcatcgcgctttacggcatcgacaatacccgcaagctg
attgcagaagcgctggcatga
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