Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02988
Help
Entry
SPHFLASMR4Y_02988 CDS
T04949
Symbol
ligB
Name
(GenBank) protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00362
Benzoate degradation
sfla00627
Aminobenzoate degradation
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SPHFLASMR4Y_02988 (ligB)
00627 Aminobenzoate degradation
SPHFLASMR4Y_02988 (ligB)
00624 Polycyclic aromatic hydrocarbon degradation
SPHFLASMR4Y_02988 (ligB)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
SPHFLASMR4Y_02988 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ASK89721
UniProt:
A0A220WA75
LinkDB
All DBs
Position
3049633..3050478
Genome browser
AA seq
281 aa
AA seq
DB search
MARITAGVGSSHVPLLGVAVDQDKTKDDYFKPIFDGYEWTRKWEQEQKPDVVILVYNDHA
SAFDANIIPTFAIGCGDSYKPADEGWGPRPVPDVEGHADLGWHIAQSLILDDFDMTIINE
MDVDHGLTVPLSMMFGQPEKWPVKIVPLAVNVVTYPVPSGNRCWALGEAIARAVESFPED
LNVQIWGTGGMSHQLQGPRAGLLNREWDNKFLDLMVGDSDAARHIPHIEYLRETGSEGIE
MVMWLIMRGALGKTTKCLHRHYHIPCSNTAIGHIVLEPDNL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaataactgcaggtgtcgggtcaagccacgttcccttgttgggggtcgcagtg
gaccaagacaagacgaaagacgattatttcaagccgattttcgacggctatgagtggacc
aggaaatgggagcaggagcagaaacccgatgtggtgatcctggtctataatgaccacgcc
tctgcttttgatgcgaatatcatcccgacgttcgccatcggttgcggggacagttacaag
cccgccgatgagggctgggggccgaggccggttcccgatgtcgaggggcatgccgatctt
ggctggcatatcgcgcaaagcctgattctggatgatttcgatatgacgatcatcaacgag
atggacgtcgaccatggcctgactgtcccgctttcgatgatgttcggtcagccggaaaaa
tggccggtcaagattgtgccgctggcggtaaatgtcgtgacctatccggtgccatcgggc
aatcgttgctgggcactgggcgaggccattgcccgcgctgtcgaaagcttccccgaagat
ctgaatgtgcagatctggggcaccggcgggatgagccatcagttgcaaggaccgcgtgcc
gggctgctcaatcgcgaatgggataacaagtttctcgacctgatggtcggcgacagcgat
gccgcgcggcatatcccgcacatcgaatatttgcgcgaaaccggcagcgaaggtattgag
atggtgatgtggctgatcatgcgcggcgccctcggcaagaccacaaaatgcctgcaccgg
cattatcatattccctgcagcaacacggccattggccatatcgtgctggaacccgacaat
ttatag
DBGET
integrated database retrieval system
