Scleropages formosus (Asian bonytongue): 108925846
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Entry
108925846 CDS
T04919
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108925846 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108925846 (polr1b)
Enzymes [BR:
sfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108925846 (polr1b)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108925846 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
108925846
NCBI-ProteinID:
XP_018593667
LinkDB
All DBs
Position
8:complement(1825605..1835014)
Genome browser
AA seq
1134 aa
AA seq
DB search
MASTGGWSAAPSAPSLKHLTQAGFGVPPREQHAAVQELVKAHVESFNQAVTDGLCRAVQA
IPPFEFTFRNDRITLAFVEAVIHKPVVAKGTVCQDPRVFPAECRGRRCTYRGKLVADVSW
SLNGVPKGIVKHALGLVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVLR
LLIMPRRNYPIAMVRPKWKSRGQGYTQYGISMYCVRDEHTAINMNLHYLDNGTVMVNFIY
QKELFFIPLGFALKALVDFTDFRIYKELIKGREENSFYKTCVTEMLRLVMEAGCTTRDKV
LSYLGGRFRVKMNLPEWYGDERCGRFLLDQCLCIHLKSDAEKFYMLCLMTRKLFAFAKQE
CMEENPDSLMCQEVLAPGQLYLMFLKEKMANWMLSVKLSMDKRAHRFPGGVNMDALVKLF
NMGTDLTKPFEYLLATGNLVSKTGLGLLQASGMSLVADKLNFIRYLSHFRCVHRGAAFTR
MRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEVVTQAHPTVTLPALLCSLGMT
PVDGVPGQPYSDCYPVLLDGAVAGWVEKDLAPSLADSLRAFKVLKEKKIPPWMEIALVPN
TGKASVYPALLLFTTPGRMVRPVHNAALGKRELIGTFEQLFLNVGVCEGDVDPEVTTHQE
LFPHSMLSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLHSYRERTDNKLYRLQTPQSP
LVRPYMYDYYNMDNYPVGTNAVVAVISYTGYDMEDAMIINKASWERGFAHGCVYKTELLD
LREKVKDEDGVVFGVKPGDPKALDKLDADGLPPVGSVLQYGDPFYSYVNLNTGQSSVIFY
RSKESCVVDNIKVCSNDSGTGRFSRVCLTMRVPRNPTVGDKFASRHGQKGILSRLWPAED
MPFAESGMMPDILFNPHGFPSRMTIGMLIESMAGKSGALHGMCHDATPFTFSEDRPALEH
FGELLRAAGYNYYGTERLYSGLSGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPLGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCLDCGSLLSPLL
EKPPPAWSATRHRKTACTLCGKSDSIDAVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacgggcggctggagcgctgcgccgtccgcgccgagtctgaagcatctgacc
caggccggcttcggcgttccgccccgggagcagcacgcggctgtgcaggagctcgtgaaa
gcgcacgtggagtcctttaaccaggcggtcactgacgggctgtgccgtgcagttcaggcc
attcctccgttcgagttcacgttcaggaatgaccggatcaccctggccttcgtggaagcg
gtcattcacaagccggtggtcgccaaggggaccgtgtgccaggacccgagggtgttcccg
gccgagtgcaggggccgccgctgcacttacaggggcaagctggtggcggacgtcagctgg
tccctcaacggcgtccccaagggcatcgtgaagcacgccctgggcctcgtgcccatcatg
gtgaagtccaagctgtgcaacctgcacggactttcccccaaggagctcatcgagcaccac
gaggaggcggaggaaatgggagggtatttcatagtgaacggcatcgagaaggtcctgcgt
ctgctcatcatgcccagaaggaattaccccatcgccatggtgcggcccaagtggaagagc
agaggccagggttacacgcagtatggtatttcgatgtactgcgtgagggacgaacacacg
gcgatcaacatgaacctgcactacctggacaacgggacggtcatggtcaacttcatctac
cagaaagagctcttcttcatccccctgggcttcgcactcaaggccctggtcgacttcacc
gacttccgcatctataaggagctgataaaagggcgcgaggagaactccttctacaagacc
tgcgtgacggagatgctgcgcctcgtgatggaggcgggctgcaccacccgagacaaagtc
ctcagctacctgggcgggcgctttcgggtcaagatgaacctgccggagtggtacggcgac
gagcggtgcggccgcttcctgctggatcagtgcctctgtattcacttgaagtcggacgcg
gagaagttctacatgctgtgtctgatgactcgcaagctgttcgccttcgccaagcaggag
tgcatggaggagaatcccgacagcctgatgtgccaggaggtgctcgcgccgggccagctc
tacctgatgttcctcaaggagaagatggcgaactggatgctgtcggtaaagctctccatg
gacaagagggcccatcgctttcctggtggcgtgaacatggacgctcttgtaaagctgttc
aacatggggaccgacttgaccaaacccttcgagtatctcctggccaccgggaacctcgtc
tccaagacaggtctgggcctcttgcaggcctctggcatgagcctggtggccgataagctc
aacttcatccgctacctgtcccacttccgctgcgtgcacagaggtgccgccttcacccgg
atgaggacgacgtcggtgcgtcggctgctgcccgagtcctggggcttcctgtgccccgtg
cacactccggacggagagccctgcggcctcatgaaccacatgacggcccactgcgaggtg
gtgacccaggctcaccccacggtcaccctgcccgccctgctctgctccctgggcatgaca
ccggtggacggcgtcccaggccagccgtactccgactgctatccggtgctgctggacggg
gccgtggcgggctgggtggagaaggatctggcgccttcccttgccgactcccttcgggcc
ttcaaggtgctcaaggagaagaagattccgccctggatggagatcgcgctggtgccgaac
accggcaaggccagcgtttaccctgccctcctgctcttcaccacacccggccgcatggtg
cgacccgttcacaacgcggcgctgggaaagcgcgagctcatcggcacctttgagcagctc
ttcctcaacgtgggcgtctgcgagggcgacgtcgaccccgaggtcacgacccatcaggag
ctcttcccccacagtatgctgagcgtggtggcgaacttcatccccttctcagaccacaac
cagagccccaggaacatgtaccagtgtcagatggggaaacaaacgatgggtttccctctg
cactcgtaccgggagcgcaccgacaacaagctctaccgcctgcagacgccccaaagcccc
cttgtccggccctacatgtacgactattacaacatggacaactatcccgtcggcaccaat
gccgtcgtggccgtgatctcctacacgggatacgacatggaggatgcgatgatcataaac
aaggcgtcctgggaaagaggttttgcccacggctgcgtctataagacggaactgctggac
cttcgcgagaaggtgaaggacgaggacggtgttgtgtttggcgtcaagcccggcgacccc
aaggcgctggacaagctggatgcagacgggctcccgcccgtgggatcggtgctgcagtac
ggcgacccgttttacagctacgtcaacctcaacaccggacagagttccgtcatcttctac
aggagcaaggagagctgcgtggtggacaacatcaaggtgtgcagcaacgacagcggcacg
gggcgcttctctcgcgtgtgcctgacgatgcgcgtgccccgcaaccccaccgtcggcgac
aagttcgccagccgccacggccagaagggcatcctgagccggctgtggcccgccgaggat
atgcccttcgcggagagcggcatgatgcccgacatcttgttcaacccgcacggcttcccc
tcccgcatgaccatcggcatgctcatcgagagcatggcgggcaagtcgggtgctctccac
ggcatgtgccacgacgcgacgcccttcaccttctccgaggatcgcccggccctcgagcac
ttcggcgagctgctgcgggcagccgggtacaactactacggcacggagcgcctgtacagc
ggcctgagtggcgtggagctggaggcggacatcttcatcggcgtggtgtactaccagcgc
ctgcgccacatggtctccgacaagttccaggtgaggacgacgggcgcgagggacaaggtg
accaaccagccgctgggtggcaggaacgtccaggggggcatccgtttcggcgagatggag
agagacgcgctgctggcgcacgggtcctccttcctgctccacgaccgtcttttcaactgc
tccgatcgctccgtggctcaggtgtgtctggactgcggcagcctgctctctcccctgctg
gagaagccgcctccggcctggtcggccacgcgccacaggaagaccgcgtgcaccctgtgc
gggaagagcgactccatcgacgcggtgtccgtgccctacgtcttccgctactttgtcgcc
gagctcgccgctatgaacatcaaggtcaaactcgacgtcaagtga
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