Scleropages formosus (Asian bonytongue): 108927102
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Entry
108927102 CDS
T04919
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108927102
04020 Calcium signaling pathway
108927102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108927102
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108927102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108927102
NCBI-ProteinID:
XP_018595677
LinkDB
All DBs
Position
20:complement(9263456..9316916)
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AA seq
2310 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDIKCQSDWCTILQAFDDFIFAFFAVEMVIKMMALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLEDSLKSTYNLSFLSPYYKPEETED
TPFICSSHRENGMLRCRDVPQLKEGSLECRLSVDFASLTHYGPEGASKNGCINWNQYYNV
CRAGELNPHKGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFIFLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTLASFSEPGSCYEELLKYISH
LYRKVKRRVTRVYSSWQNKRRKKVNPNSAGGAGGGAGTGAGSAGANGQGRRWSDKRHFRS
IHHHHHHHHHHHYHISNGSPSVGPEIRETGDMMELKTMGPEPQLILTSPQSPCSGAESVH
SIYHADCHLKGPQVHHVPSDLVGNVQLLAGLNGGMNYPTIMPSIICNRTNTGSRAKDKRA
VSHTLSLNKASRNLNIPDPYGMLNQLVGGHGVCQGTSCLSGLNLSFQTAGTVPALLPCEL
TNCPYCARVLENPDTELSDSDSFCSRSEADAYGITRDMHYGTEDRTIRSQRHLKRPKEKN
CVARAWENFRDKLKRIVDSKYFNRGIMIAILINTLSMGIEYHEQPDELTDVLEISNIVFT
SMFALEMLLKLLAYGLFGYIKNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLK
LVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLRMENGDTIPD
RKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAI
LVEGFQAEGDANRSEAEDDKLSTNFEEEEKIRELQAAEMKMHSLMIMPNGHLDPRASMPI
IMRTAATPMPTPKPSPYMDSVHTFCESRRGSSASIDPAGYDQKSLSSQRSSPCPPWGTGS
NWGSRRSSWNSLGRAPSLKRKDQSGERESLLSGEGHRSSDDDDSDEGASSKAGSVACTSP
HRHTDSLDLPELLQVPTLRHPGEHHDCNGKSLRLPPDFLRPDLGKDEPDYEEDADESICF
QIKKMLEPYKPQWCRDHEDWSLYLFSPQNEFRMTCQKVIAHKMFDHVVLVFIFLNCITIA
LERPDILPHSMERVFLSVSNYIFTVIFVAEMTVKVVALGFYAGKNSYLQSSWNVLDGVLV
FVSIVDIIVSLASAGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGN
IVLICCAFFIVFGILGVQLFKGKFYHCEGFDTRNITNKSDCLQANYRWIRRKYNFDNLGQ
ALMSLFVLSSKDGWVNIMYDGLDAVGVDQQPIRNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEAEEARLREEKRLKRLEKRRRKAQQRPYYADYSPARLYIHTLCTNHY
LDLFITCIICINVVTMSMEHYNQPKYLEEALKYCNYVFTIVFVFEALLKLVAFGFRRFFK
ERWNQLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRAL
LDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDENPCEGLSRHATFENFGMAF
LTLFRVSTGDNWNGIMKDTLRECRSEDKHCLSYLPLISPLYFVTFVLIAQFVLVNVVVAV
LMKHLEESNKEAKEDAEMDAEIEMEMTRRLSTTSGGMTLGPESRASYVGPLPDSPAQDEV
MHCGEENLLSVRKACVSRMHSLPNDSYMFRPVRSANAPFPLAEVEPYEGNLHLGSVSSVN
SQPCEGSSLLRVPGALAHGRPTSVYDNSSLPRIAPPWLSPSPSVSRPLRRQEAIKADSID
VQSCDSKDNLERQSSDSLQLRVPMPGSFTFPRPGASGQGSPLQTPRSRTSSVHTHRQVYS
QRSIPSRPSSQGSGRSSSPSNSIFESADPTDEEVRHINSSAKGWGGDQLDLRSHSLSPYA
CPDGKVPVPLKNCSSAANLLACGLREKELKKFYSVDTKGFLAKPSWAEDTRRHSIEICPS
VDDSGLDFEAPMEGRRRSSLHGQTVPPECLTVHRKKKMSPPCISVEPPLETELLTPAASR
GKIPESSMLLRRRTPSFDSPLQRDSLELPDPQLLAETIPKAERQPSCRNEHLSIPQFSFD
QSDISSLSSMSDILSDSDQSTHSSYFDAKVEGRTETELSKLGHLKIPASGELESRSQTLA
KIQESRSPLRKRGLIRMASTRDEDVDDSAA
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctcttgaactgcgtgaccctcggcatgttccagccttgcgaggacatc
aagtgtcagtctgactggtgcaccatcttgcaggcatttgacgacttcatttttgccttt
tttgccgtggagatggtcatcaagatgatggctctcgggatttttgggcagaagtgttac
ctgggcgacacgtggaatcgtttggacttcttcattgtcatggcggggatgatggagtac
tctttggatggccacaacgtcagcctctccgccattcgcactgtgcgcgtgctcagaccc
ctccgagccatcaacagagttcccagtatgagaatactggtgactctgctcctagataca
ttgcctatgttaggcaacgtcctcctcctttgtttttttgtgttctttatatttgggatt
gtcggcgtgcaactgtgggccggcttgctgaggaacaggtgtttcctagaagacagtttg
aaatcgacatataatttgtccttcctgagcccttactacaagcctgaggaaacggaggac
acaccattcatctgctcctcacacagggagaatggcatgctgcgttgccgcgatgtgccc
cagctgaaggagggcagcctcgagtgccggctcagcgtggactttgccagcttgactcac
tacggtccagaaggggccagcaagaacggctgcatcaactggaaccaatattacaatgta
tgcagggccggggagctcaacccgcacaaaggggctattaactttgacaatattggctac
gcctggatcgctatattccaggtgatcactttggaaggatgggtggacatcatgtattat
gtcatggatgcacattccttttacaattttatatattttatatttctcataatagtgggg
tctttcttcatgatcaacctttgcttggttgtgatcgcaacccaattttcggagaccaag
cagcgggagaaccagctgatgcaggagcagcgagcgcggtacctctccaatgacagcacg
ctggctagtttctcagagcccggcagctgctacgaggagctactcaagtacatcagccac
ctgtatcgcaaggtgaagcgtcgggtgacgcgggtctacagcagctggcaaaacaagcgc
aggaagaaagtaaaccccaacagtgctggcggggctggaggtggagcggggacgggggca
ggcagtgcgggtgcgaatggccagggcaggcgatggagtgataagcggcatttccgctcc
atccaccaccatcatcaccaccatcaccaccatcactaccacatcagcaatggcagcccc
tctgtcggcccagagatccgtgaaactggtgacatgatggaattgaagaccatgggacct
gagccccaactcatcttgacctccccgcagagtccttgctctggggcagagtcagtgcac
agtatctaccatgcagactgtcacctcaaaggccctcaggtccaccacgtgccgtcagac
ctagtggggaatgtccagttgctagccgggctcaatgggggtatgaactaccccaccatc
atgccctccatcatctgcaaccgcaccaacactggtagcagggccaaggacaagagggct
gtcagccacaccctgagtctcaacaaggcctccaggaacctcaacatccccgatccctac
ggcatgctgaaccaattagttggggggcacggtgtgtgccagggcactagctgtctctcg
ggtctgaacctgtccttccaaacagcaggcacagtaccggctctcttgccctgcgagttg
acgaactgcccctattgtgcccgggtcctggagaaccccgacacggagctgagtgactca
gacagcttctgctcccggtccgaagcggatgcgtacggcatcactcgtgacatgcactac
ggcactgaggacaggacaatccggtcgcagcgacacctaaagaggcccaaggaaaagaac
tgtgttgctcgagcctgggagaactttcgagacaagctgaaacgcattgtggacagcaag
tacttcaatcgtgggattatgattgccattttgatcaacactttaagcatgggcatcgag
tatcacgagcagcccgatgagctcacagatgtcctggagatcagcaacattgtcttcacc
agcatgttcgctctggagatgctgctgaagctccttgcctacggtctcttcggctacatc
aagaacccctacaacatcttcgacgggatcatcgtcgtcatcagtgtgtgggagatcatc
ggccaggcagatggcggcctttcggtcctgcggaccttccgtctgctgcgcgtactcaag
ctggtgcgcttcctgcccgccctcaggaggcagttggtggtgttgatgaagaccatggat
aacgtggccaccttctgcatgctgctcatgctcttcatcttcatcttcagtattctgggg
atgcacctgttcggatgcaaattcagcctgaggatggagaacggggacaccattccagac
aggaagaattttgactccttgctgtgggccattgtcactgtctttcaaatcctgacacag
gaggactggaacgtggtgctctacaatggcatggcctccacgtctccttgggctgctctc
tactttgtggctctgatgaccttcggaaactatgtcctcttcaacctgttggtggccatt
ctggtggagggttttcaagccgagggagacgcaaataggtcagaagcggaggacgacaaa
ctgtcaacaaattttgaagaggaagagaagatccgggagctgcaggccgcagaaatgaag
atgcactctttgatgatcatgccaaacggacacctggaccccagggctagcatgcccatc
atcatgcgcacagcggccactcctatgcccacacccaagccctccccctacatggactcg
gtgcacaccttctgcgagtcccgcaggggcagcagtgcttccatcgaccccgccggctat
gaccagaagtccctgtccagccagaggagctccccctgccccccttggggaacgggaagc
aactggggcagtcgacgttccagctggaacagcctgggtcgtgctcccagcctgaagagg
aaggaccagtctggggagcgcgagtccctgctctcaggcgagggccacaggagttctgac
gatgacgactcagatgaaggtgcctccagcaaggcgggcagtgtggcctgcacatccccg
caccgccacaccgactctctggacctgccagagctgctgcaggtgcccacgctacgccac
cctggcgagcaccacgactgcaatggcaagagccttcgtctgccgcccgactttctgcgc
cccgacctgggcaaagatgagcctgactatgaagaagatgcggatgagagcatctgtttc
caaatcaagaagatgctggagccctacaagcctcagtggtgcagagatcatgaggactgg
tccctatacctgttttcaccgcagaatgaatttcgcatgacgtgtcagaaggtcatcgca
cacaaaatgtttgaccacgtggtcctggtgttcatcttcctgaactgcatcactattgca
ctggagaggcccgacatcctcccccacagcatggagcgggtctttctcagtgtctccaac
tatattttcactgtgatctttgttgctgaaatgactgtgaaggtagtggccttgggcttc
tacgcagggaagaacagctacctgcagagcagctggaatgtgctggatggagtgctggtc
ttcgtctccattgtggacatcatcgtctccctggcatcagctggagggaaccggattttg
gggatcctacgggtgttgcgtctgctgaggactctgcgacccttgagggtgatcagccgt
gcaccgggtctcaaacttgtggtggagacactgatcacctccctgcggcctattggcaac
atcgtgctgatctgctgcgctttcttcatcgtcttcggcatcctgggcgtgcagcttttc
aaagggaagttttaccactgtgagggatttgacacgaggaacatcaccaataagtcagat
tgtctgcaggcaaactatcgctggatacgaaggaagtacaactttgacaacctgggacag
gctctcatgtctctgtttgtgctgtcctccaaggacggctgggtcaacatcatgtacgat
ggcctggatgctgtgggagtggatcagcagccaatccgcaaccacaacccctggatgctg
ctgtacttcatttccttcctgctcatcgtcagcttctttgtgctcaacatgttcgtgggc
gtggtggtagagaacttccacaagtgccggcagcaccaggaggcggaagaggcacgcctt
cgcgaggagaagcgcctgaagcggctggagaaaaggcgcaggaaagcccagcagagaccg
tactacgcggactactcccccgcccgcctgtacatacacacactgtgcaccaaccactac
ctggacctcttcatcacctgcatcatttgcatcaacgtcgtcaccatgtccatggagcac
tacaaccagccaaagtaccttgaagaggccctgaagtactgcaactatgtcttcaccatt
gtcttcgtcttcgaggcgctcctcaagctcgtcgcctttggctttcgcagattcttcaaa
gagcgatggaaccagttggatctggccattgttctgctgtccatcatgggaattacgctg
gaggaaatcgagatcaacgcgtcgctccccatcaacccaaccataatccggatcatgagg
gtgctgaggatagcaagagtgctgaagctgctcaagatggccacaggcatgagagccctg
ctggataccgtggtgcaggccctcccgcaggtggggaatctgggcctgctcttcatgctc
cttttctttatctatgctgctctgggcgtggagttgtttggcaagctggagtgcaatgat
gaaaacccatgtgagggtctgagcagacacgccacatttgagaactttgggatggccttt
ctcaccctcttcagggtgtccacaggagacaactggaatggcatcatgaaggacacccta
cgtgagtgtcgaagtgaggacaagcactgcctgagctacctgccgctgatctcaccgctc
tacttcgtcaccttcgtgctgatcgcccagttcgtgctggtcaacgtggtggtggccgtg
ctcatgaagcacctcgaggagagcaacaaggaggccaaggaggatgcggagatggatgcg
gagatcgagatggagatgacacgccgcctcagcacgacatctggcgggatgaccctgggg
cccgagagcagggccagctatgtgggaccactcccagactcacctgcacaggacgaagtg
atgcactgtggcgaggagaacctgttgtcggtgaggaaagcgtgtgtgtcgagaatgcac
tcgcttcccaacgacagctacatgttccgccccgtgaggtcggccaacgccccctttccc
ctcgctgaagtggagccttacgaagggaacctgcatctaggttcggtctcttctgtaaat
tcccagccttgtgaaggaagctccctgctgcgtgtccctggagccttggctcacggcagg
ccgacctctgtgtatgacaacagcagcctgcccaggatagccccgccatggttgagcccc
tcgcccagtgttagcaggcccctgcgcagacaggaggcgatcaaagccgactccatcgat
gtgcagagctgtgactcaaaggacaacctggagcggcagtccagtgacagcctacagctc
agggtgcccatgcctggcagcttcacgttccccagaccgggagcttctggtcaaggctca
cctttgcagaccccgcgcagccgcacatccagcgtgcacactcaccgccaggtgtacagc
cagcgcagcattcccagcaggccaagcagccaggggagcggccgcagcagcagtccctcc
aactccatattcgagtcagcagacccaacggacgaagaggtgcgccacatcaacagctcc
gccaagggctggggaggcgaccagcttgaccttcgcagccactccctgtccccgtacgct
tgtcctgacggcaaggtccccgtgcccctgaagaactgcagcagcgccgcgaacctgctg
gcctgtggactccgagagaaggaactgaaaaagttctacagcgtggacaccaaaggcttc
ctggccaagccctcgtgggccgaagacacgcggcggcactccatcgagatttgcccctcg
gtagacgacagcggcttggactttgaagcaccgatggagggacgcaggaggtcctccctg
cacggccagacagtgccccccgagtgcctgacagtccaccggaaaaagaagatgagcccg
ccctgtatctcggtggagccaccccttgagacagagctcctgaccccggctgcatcgcgt
ggcaaaatacccgaaagcagcatgctgctgaggagaaggacgccctccttcgactccccc
ctgcagcgtgactccctagagttgccggacccccagctccttgcagaaaccatccccaaa
gcagagaggcaaccttcgtgccgcaacgagcacctgtccattccacagttctctttcgac
cagtcagacattagttccctcagcagcatgtcggacatcctctccgacagcgaccagtcc
acgcactcctcgtacttcgacgccaaagtagagggtcggacggagaccgaactcagtaag
ctgggccatctcaagattccagcaagcggggagctggagagcaggagccaaacgttggcc
aaaatccaggagtccaggagccctctgaggaagaggggattaatccgcatggcaagcaca
agagacgaagacgtcgacgactccgcggcatag
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integrated database retrieval system
