Scleropages formosus (Asian bonytongue): 108930913
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Entry
108930913 CDS
T04919
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04210
Apoptosis
sfm04218
Cellular senescence
sfm04620
Toll-like receptor signaling pathway
sfm04621
NOD-like receptor signaling pathway
sfm04622
RIG-I-like receptor signaling pathway
sfm04623
Cytosolic DNA-sensing pathway
sfm04625
C-type lectin receptor signaling pathway
sfm04920
Adipocytokine signaling pathway
sfm05132
Salmonella infection
sfm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108930913
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108930913
04218 Cellular senescence
108930913
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108930913
04621 NOD-like receptor signaling pathway
108930913
04622 RIG-I-like receptor signaling pathway
108930913
04623 Cytosolic DNA-sensing pathway
108930913
04625 C-type lectin receptor signaling pathway
108930913
09152 Endocrine system
04920 Adipocytokine signaling pathway
108930913
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108930913
09171 Infectious disease: bacterial
05132 Salmonella infection
108930913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108930913
Transcription factors [BR:
sfm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108930913
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
108930913
NCBI-ProteinID:
XP_029107737
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All DBs
Position
5:16942769..16962505
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AA seq
724 aa
AA seq
DB search
MEILYVYVIKCPFLHFRVIISADGPYLQIAEQPKQRGFRFRYGCEGPSHGGLPGASSEKN
RKSYPQVKICNYQGPARVVVQLVTASQEPHLHAHSLVGKQCDKGICVVNLQPKESIISFP
NLGILHVTKKNVSKKLEERMTDAFRMGYNYGVTIHPEIDSIHGEVRAPRELTELQRNLIS
NAAMSQSKEMDLSVVRLMFTAFLPNSDGGFTRRLDPVISDPIYDSKAPNASNLKIVRMDR
TAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDTGLTWEDFGDFSPTDVHRQFAIVFKTPK
YRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRKRQKTLPNFQDFGHPG
PGAGGGGMYRGGGAGPASGGGPGGGGGHSYYQGYPAYNSYGNGYTFSHGAAGGGAGNSMK
HAPHRPADDGGHTDRHREWRAVETLCNQEAQAEDKDQASTEHGSGAGEWLPSQQAPSAGL
EDKTNCDTVPSPFSPGTFHRGENLGSPRGNEEGLGGKHKGEEEGEKNSKDFAPRSTAAKS
TRSAEGCGFFSDKQYGSRKNPGVALTGEGTVMLRGEALRAVMHGTDRKDPTEQERWNLAP
SITSLDDSKVSGDTVGQLLEALRTAGAGLGIHLLERAVWELDRLGTLAQITAPSPFQSTK
NKKAEHDRQEDGNVYDRRAVISQPYLRPGLFEELPVGPPQCCAPQGGTAKSGSLSSLTSL
QSAA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaaattctgtacgtttatgtgataaagtgcccttttctccatttccgtgttattatt
tcagctgacgggccttacctccaaattgcagagcaacccaaacagcggggattcaggttc
cgatacggctgcgaggggccgtcccacggtgggctcccaggggcctccagtgagaagaac
aggaagtcctaccctcaagtgaaaatatgcaactaccagggtccggcacgcgtggtggtg
caactggtcaccgcctcccaggaaccccacctccacgcccacagcctggtgggaaagcag
tgcgacaagggcatctgtgtggtcaacctgcagccgaaggaatccatcatcagctttccg
aacctgggcatcctgcatgtgaccaagaagaatgtcagcaagaagctggaggaacgcatg
actgatgccttcaggatgggttacaactacggggtcacgatccacccggaaatcgacagt
atccacggggaggtccgcgcaccgcgggagctcacggaactccaaagaaacctgatctcc
aatgctgctatgagccagtccaaggagatggacctgagtgtggtgcgtctgatgttcacc
gccttcctgcccaacagtgacggtggcttcacccgccgcctggaccccgtcatctccgac
cccatctatgatagcaaggcccccaatgcatcgaacctgaagatagtgcggatggaccgc
actgcaggttgtgtgacaggtggagaagaggtttacctcctatgcgacaaggtgcagaaa
gatgacatccaggtgcgcttctatgaggacgatgacacaggactcacgtgggaggacttt
ggagacttctcacccaccgatgttcacaggcagtttgccatcgtcttcaagactcctaag
taccgggaccagaacctccagaaacccatctctgtatttgtgcagctcaagaggaagtcg
gacaatgagaccagcgagccaaagccattcacttaccatcctcagatcatagataaggag
gaggtgcagcggaaaaggcagaagactcttcccaacttccaggactttggccatccaggg
ccaggggcaggaggcggaggcatgtacaggggaggcggggctggtccagcttctggagga
ggtcctggaggtggaggaggtcactcctactaccagggctaccctgcctacaacagctac
ggaaacggctacactttctcacatggtgcggctgggggcggtgctgggaacagcatgaaa
cacgccccccatagaccagcagatgatggcggtcacacggacagacaccgggagtggaga
gcggtggagacattgtgtaaccaggaggcacaggctgaggacaaggaccaggcctccacg
gaacacggatccggagctggggaatggcttccgtcgcagcaggctccttccgcaggcctg
gaggacaagaccaactgcgacactgtcccgtctcccttctctccaggtacattccaccgt
ggggagaacctcggatctcctcgtggcaatgaagaggggcttggcggcaagcataagggg
gaggaggagggggagaagaatagcaaggattttgccccgagaagcaccgctgcgaaatcg
acaaggtccgctgagggttgtggctttttcagtgacaagcagtacgggtcacgcaaaaac
cccggtgtggcgctcactggagagggcaccgtcatgcttagaggggaggcactgagggcc
gtgatgcacggcacggaccggaaggacccgacagagcaggaaagatggaacctggcacct
tcgatcacatcgctggatgactccaaggtatcaggggatacagtgggacagctgctggag
gccctgaggacagctggtgctggattgggcatccacctcctggagagggctgtgtgggag
ctggaccgcctgggcactcttgcccagatcacagctccgtcccccttccagagtacgaag
aacaagaaggcagagcacgaccgccaggaggacggcaatgtgtatgaccgcagggcggtg
atctcgcagccgtacctccggcctggcctatttgaagagttgcctgttggtcccccacaa
tgctgtgcgccacagggagggacggcaaaatcgggatccctttcctcactgacctcattg
cagagtgctgcctga
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