Scleropages formosus (Asian bonytongue): 108935098
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Entry
108935098 CDS
T04919
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108935098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfm04090
]
108935098
04091 Lectins [BR:
sfm04091
]
108935098
CD molecules [BR:
sfm04090
]
Proteins
108935098
Lectins [BR:
sfm04091
]
I-type lectins (Siglecs)
108935098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set
C2-set_2
C1-set
ICAM1_3_5_D2
ICAM_N
Motif
Other DBs
NCBI-GeneID:
108935098
NCBI-ProteinID:
XP_029106408
LinkDB
All DBs
Position
3:13519575..13526704
Genome browser
AA seq
979 aa
AA seq
DB search
MPFFGVWILIVTAAVSAARLEVKVNPRVALSHVGDRLVAECEAQCAENAKFLWDTLSDVP
LEGRVTRGESAKSFLTFDPVTIENEETFVCKVTCGKDWRQSRIKVTVYSFPKDPVISGNE
NLVAGENASITCKVPDVYPPESLRIEWLRNGQVVSKDDSEGGDSRSVQTVSSTYTFMPEA
EDNGQAISCRATLQLSGLPDRNKTRESTLPLAVQSPPSKTTVSVNPAEEPKEGECVTISC
QSDGAPACNMILRRQTNGQYTELQSSVGSNLSYTIPSIQLEDTGLYECEALNEHGRQNHT
VQVMVRASPRNTTVQVSPSWNVPQGRNITVSCTTVSFPAATAVLRRLSDSKELSSSDCVF
HLLNLTTSDAGPYLLNVSNALGYEIKFFNLSIMAPPSKITVSVNPAEEPEEGEYVTISCQ
SDGVPACNMTLRRQTNGQYTELQSSVGSNLSYTIPSIQLEDTGLYECEALNEHGRQNHTV
QVMVKASPRNTTVQVSPSWNVPQGRNITVSCTTVSFPAATAVLRRLSDSKELSSSDCVFH
LLNLTTSDAGPYLLNVSNALGYEIKFFNLSIMAPPSKITVSVNPAEEPEEGEYVTISCQS
DGVPACNMTLRRQTNGQYTELQSSVGSNLSYTIPSIQLEDTGLYECEALNEHGRQNHTVQ
VMVKASPRNTTVQVSPSWNVPQGRNITVSCTTVSFPAATAVLRRLSDSKELSSSDCVFHL
LNLTTSDAGPYLLNVSNALGYEIKFFNLSIMAPPSKITVSVNPAEEPEEGEYVTISCQSD
GVPACNMTLRRQTNGQYTELQSSVGSNLSYTIPSIQLEDTGLYECEALNEHGRQNHTVQV
MVKASPRNTTVQVSPSWNVPQGRNITVSCTTVSFPAATAVLRRLSDSKELSSSDCVFHLL
NLTTSDAGPYLLNVSNALGYEIKFFNLSIMAHTGESPALNMTVPTVATVSLLPAIALVVH
YLRKFSRTFSYKVGPSSVV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctttggcgtttggattttaatagtgacagctgcagtgtcggcagcccgtttg
gaggtgaaggtgaacccacgcgtggctctgtctcacgtgggggacagactggtcgccgag
tgcgaggcgcaatgcgcggaaaatgccaagttcctgtgggacaccttgagcgacgtccct
ctggaaggacgcgttaccaggggcgaaagtgccaagtccttcctcacttttgacccggtc
acgattgagaacgaggaaacttttgtgtgcaaggtcacgtgtggaaaagactggagacaa
agtcggataaaagtcacagtgtactcttttcccaaggaccctgtcatttctggaaatgaa
aacttagtagcaggagaaaatgcgagcatcacatgcaaagtccccgatgtctacccaccc
gagtctctgagaatcgaatggctgcggaatggacaggttgtgtctaaggatgacagcgag
ggaggggacagcagatcggtccaaacggtgtcctccacatacacctttatgcccgaagct
gaagataatggacaggccattagctgcagggctacgcttcagctttctgggctccctgac
agaaacaaaaccagagaatcaactctaccactcgctgtgcagtctccaccaagtaaaacc
actgtctctgtgaatccggctgaggagccgaaggaaggggaatgtgtgaccatttcctgt
caatcagatggtgccccagcatgtaacatgatcctgcgtcgacagaccaacggccagtac
acagagttgcagtccagtgtgggctccaatctctcctacacgatcccttccatccagctg
gaggacactggtctgtacgaatgtgaggccctcaatgagcatgggcgtcagaaccacact
gtccaggttatggtgagagcatcacccaggaacactacggtccaggtatcgccctcctgg
aatgtcccccaaggtcggaacatcactgtctcctgcaccacagtgagcttcccagcagcc
actgcggtcctgaggagactctctgacagcaaggagctctcctcctcagactgcgtcttc
cacctgctgaacctcaccaccagcgacgccggtccttatctactcaacgtctccaacgcc
ctgggatatgagattaagtttttcaacttaagcataatggctccaccaagtaaaatcact
gtctccgtgaatcctgctgaggagccggaggaaggagagtatgtgaccatttcctgtcaa
tcagacggtgtgccagcgtgtaacatgaccctgcgtcgacagaccaacggccagtacaca
gagctgcagtccagtgtgggctccaatctctcctacacgatcccttccatccagctggag
gacactggtctgtacgaatgtgaggccctcaatgagcatgggcgtcagaaccacactgtc
caggttatggtaaaagcatcacccaggaacactacggtccaggtatcgccctcctggaat
gtcccccaaggtcggaacatcactgtctcctgcaccacagtgagcttcccagcagccact
gcggtcctgaggagactctctgacagcaaggagctctcctcctcagactgcgtcttccac
ctgctgaacctcaccaccagcgacgccggtccttatctactcaacgtctccaacgccctg
ggatatgagattaagtttttcaacttaagcataatggctccaccaagtaaaatcactgtc
tccgtgaatcctgctgaggagccggaggaaggagagtatgtgaccatttcctgtcaatca
gacggtgtgccagcgtgtaacatgaccctgcgtcgacagaccaacggccagtacacagag
ctgcagtccagtgtgggctccaatctctcctacacgatcccttccatccagctggaggac
actggtctgtacgaatgtgaggccctcaatgagcatgggcgtcagaaccacactgtccag
gttatggtaaaagcatcacccaggaacactacggtccaggtatcgccctcctggaatgtc
ccccaaggtcggaacatcactgtctcctgcaccacagtgagcttcccagcagccactgcg
gtcctgaggagactctctgacagcaaggagctctcctcctcagactgcgtcttccacctg
ctgaacctcaccaccagcgacgccggtccttatctactcaacgtctccaacgccctggga
tatgagattaagtttttcaacttaagcataatggctccaccaagtaaaatcactgtctcc
gtgaatcctgctgaggagccggaggaaggagagtatgtgaccatttcctgtcaatcagac
ggtgtgccagcgtgtaacatgaccctgcgtcgacagaccaacggccagtacacagagctg
cagtccagtgtgggctccaatctctcctacacgatcccttccatccagctggaggacact
ggtctgtacgaatgtgaggccctcaatgagcatgggcgtcagaaccacactgtccaggtt
atggtaaaagcatcacccaggaacactacggtccaggtatcgccctcctggaatgtcccc
caaggtcggaacatcactgtctcctgcaccacagtgagcttcccagcagccactgcggtc
ctgaggagactctctgacagcaaggagctctcctcctcagactgcgtcttccacctgctg
aacctcaccaccagcgacgccggtccttatctactcaacgtctccaacgccctgggatat
gagatcaagtttttcaacttaagcataatggcccacacaggggagtctcctgccttgaac
atgacagtccccactgttgctacagtttctttgttacctgcaattgccttggtggtgcat
tacttgaggaaattcagtcggacattctcatacaaagtgggcccttcatctgttgtgtag
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